Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019343 Camellia sinensis var. sinensis HOM05D001363 ORTHO05D006255 3.6e-143 511.5 254 100.0
CSS0044369 Camellia sinensis var. sinensis HOM05D001363 ORTHO05D006255 6.2e-119 431.0 245 90.2
vmacro06016 Vaccinium macrocarpon HOM05D001363 ORTHO05D006255 4.7e-82 308.5 223 72.2
Rhsim03G0264200 Rhododendron simsii HOM05D001363 ORTHO05D006255 3.0e-81 305.8 223 73.1
Dinv41718 Davidia involucrata HOM05D001694 ORTHO05D000248 5.7e-80 301.6 211 73.5
Actinidia38636 Actinidia chinensis HOM05D001363 ORTHO05D006255 1.1e-78 297.4 227 68.7
Nn2g12720 Nelumbo nucifera HOM05D001363 ORTHO05D006255 2.7e-77 292.7 244 63.1
Haze_22100 Corylus avellana HOM05D001363 ORTHO05D006255 1.3e-76 290.4 220 68.6
Cfa013508 Carpinus fangiana HOM05D001363 ORTHO05D006255 6.5e-76 288.1 220 68.6
QL02p097661 Quercus lobata HOM05D001363 ORTHO05D006255 6.5e-76 288.1 261 61.3
Lj9P685T22 Lonicera japonica HOM05D001363 ORTHO05D006255 1.9e-75 286.6 223 65.5
TAR625G1447 Trochodendron aralioides HOM05D001363 ORTHO05D006255 4.7e-74 282.0 242 62.8
HanXRQChr05g0143031 Helianthus annuus HOM05D001363 ORTHO05D006255 2.6e-72 276.2 224 63.4
TWI34G1409 Tripterygium wilfordii HOM05D001363 ORTHO05D006255 3.4e-72 275.8 248 59.7
MELO3C004027.2 Cucumis melo HOM05D001363 ORTHO05D006255 2.8e-71 272.7 220 65.0
ClCG11G012170 Citrullus lanatus HOM05D001363 ORTHO05D006255 7.0e-70 268.1 219 63.0
EL10Ac4g08144 Beta vulgaris HOM05D001363 ORTHO05D006255 2.0e-69 266.5 223 60.5
CsaV3_2G008370 Cucumis sativus L. HOM05D001363 ORTHO05D006255 2.0e-69 266.5 220 63.6
ECA236G4924 Erigeron canadensis HOM05D001363 ORTHO05D006255 4.5e-69 265.4 226 61.9
Thecc.09G173000 Theobroma cacao HOM05D001363 ORTHO05D006255 7.7e-69 264.6 222 60.4
Atru.chr7.643 Acer truncatum HOM05D001363 ORTHO05D006255 1.0e-68 264.2 223 60.1
PGR142G0790 Punica granatum HOM05D001363 ORTHO05D006255 5.0e-68 261.9 225 60.9
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 8.5e-68 261.2 223 59.6
CiPaw.08G036500 Carya illinoinensis HOM05D001363 ORTHO05D006255 1.9e-67 260.0 242 59.9
RcHm_v2.0_Chr4g0402491 Rosa chinensis HOM05D001363 ORTHO05D006255 2.5e-67 259.6 221 59.7
MD14G1172600 Malus domestica HOM05D001363 ORTHO05D006255 4.2e-67 258.8 255 54.9
Ciclev10008928m.g Citrus clementina HOM05D001363 ORTHO05D006255 7.2e-67 258.1 228 58.8
Cc06_g13270 Coffea canephora HOM05D001363 ORTHO05D006255 7.2e-67 258.1 222 64.9
Lsat_1_v5_gn_8_66820 Lactuca sativa HOM05D001363 ORTHO05D006255 7.2e-67 258.1 222 62.2
Cpa.g.sc95.51 Carica papaya HOM05D001363 ORTHO05D006255 3.6e-66 255.8 247 57.1
Manes.01G004820 Manihot esculenta HOM05D001363 ORTHO05D006255 4.7e-66 255.4 232 59.1
AUR62034263 Chenopodium quinoa HOM05D001363 ORTHO05D006255 1.0e-65 254.2 245 57.1
Gohir.A05G004600 Gossypium hirsutum HOM05D001363 ORTHO05D006255 2.3e-65 253.1 248 56.9
C03p14990 Brassica napus HOM05D001363 ORTHO05D006255 5.2e-65 251.9 222 55.4
Gorai.009G005300 Gossypium raimondii HOM05D001363 ORTHO05D006255 5.2e-65 251.9 248 56.5
Sc08g0005330 Simmondsia chinensis HOM05D001363 ORTHO05D006255 1.2e-64 250.8 244 58.6
MD06G1167000 Malus domestica HOM05D001363 ORTHO05D006255 2.0e-64 250.0 255 52.9
FvH4_4g08251 Fragaria vesca HOM05D001363 ORTHO05D006255 3.4e-64 249.2 215 60.0
CANSAT11G0841 Cannabis sativa HOM05D001363 ORTHO05D006255 4.4e-64 248.8 221 61.5
BolC3t13941H Brassica oleracea HOM05D001363 ORTHO05D006255 5.7e-64 248.4 224 55.4
Sed0007175 Sechium edule HOM05D001363 ORTHO05D006255 5.7e-64 248.4 220 60.5
Aqoxy2G00910 Aquilegia oxysepala HOM05D001363 ORTHO05D006255 1.3e-63 247.3 246 55.7
A03p12830 Brassica napus HOM05D001363 ORTHO05D006255 2.2e-63 246.5 222 55.0
BcaC01g06488 Brassica carinata HOM05D001363 ORTHO05D006255 3.7e-63 245.7 223 53.8
Eucgr.C00157 Eucalyptus grandis HOM05D001363 ORTHO05D006255 4.9e-63 245.4 254 55.1
Potri.018G093100 Populus trichocarpa HOM05D001363 ORTHO05D006255 6.3e-63 245.0 260 53.5
BraA03t10591Z Brassica rapa HOM05D001363 ORTHO05D006255 1.1e-62 244.2 222 54.5
MBI14_g17365_MAGBIO Magnolia biondii HOM05D001363 ORTHO05D006255 1.1e-62 244.2 255 59.2
Gohir.D05G005500 Gossypium hirsutum HOM05D001363 ORTHO05D006255 1.8e-62 243.4 246 55.3
GSVIVG01029206001 Vitis vinifera HOM05D001363 ORTHO05D006255 2.4e-62 243.0 163 74.2
Sp6g19160 Schrenkiella parvula HOM05D001363 ORTHO05D006255 7.0e-62 241.5 222 54.5
CARHR271240 Cardamine hirsuta HOM05D001363 ORTHO05D006255 2.7e-61 239.6 223 53.4
PGSC0003DMG400020439 Solanum tuberosum HOM05D001363 ORTHO05D006255 5.9e-61 238.4 223 59.6
CAN.G1081.7 Capsicum annuum HOM05D001363 ORTHO05D006255 1.0e-60 237.7 222 59.5
FAN07G0609 Fragaria x ananassa HOM05D001363 ORTHO05D006255 1.1e-59 234.2 205 59.5
DCAR_014703 Daucus carota HOM05D001363 ORTHO05D006255 2.5e-59 233.0 219 57.5
ATR0580G043 Amborella trichopoda HOM05D001363 ORTHO05D006255 7.3e-59 231.5 232 52.6
Solyc07g055170.1 Solanum lycopersicum HOM05D001363 ORTHO05D006255 9.5e-59 231.1 222 58.1
AT5G57450 Arabidopsis thaliana HOM05D001363 ORTHO05D006255 1.2e-58 230.7 223 50.7
Thhalv10015458m.g Eutrema salsugineum HOM05D001363 ORTHO05D006255 1.2e-58 230.7 223 53.4
Aa31LG3G13330 Aethionema arabicum HOM05D001363 ORTHO05D006255 2.0e-56 223.4 223 51.1
Ca_12655_v3 Cicer arietinum L. HOM05D001363 ORTHO05D006255 5.7e-56 221.9 256 50.0
Oeu056514.1 Olea europaea HOM05D001363 ORTHO05D006255 2.2e-55 219.9 224 56.2
arahy.Tifrunner.gnm1.ann1.YA5C6P Arachis hypogaea HOM05D001363 ORTHO05D006255 2.4e-54 216.5 241 54.8
MSTRG.19704 Avicennia marina HOM05D001363 ORTHO05D006255 1.2e-53 214.2 244 53.3
BcaB01g04460 Brassica carinata HOM05D001363 ORTHO05D006255 2.7e-53 213.0 169 62.7
Migut.J01476 Erythranthe guttata HOM05D001363 ORTHO05D006255 4.6e-53 212.2 221 54.8
Glyma.18G288200 Glycine max HOM05D001363 ORTHO05D006255 1.3e-52 210.7 250 51.6
Phvul.008G013800 Phaseolus vulgaris HOM05D001363 ORTHO05D006255 3.0e-52 209.5 220 55.0
THA.LOC104813524 Tarenaya hassleriana HOM05D001363 ORTHO05D006255 3.9e-52 209.1 179 60.9
Sopen07g027050 Solanum pennellii HOM05D000134 ORTHO05D003318 1.1e-51 207.6 205 57.6
BcaC01g06495 Brassica carinata HOM05D001363 ORTHO05D006255 1.5e-51 207.2 179 58.1
arahy.Tifrunner.gnm1.ann1.2PT66T Arachis hypogaea HOM05D001363 ORTHO05D006255 1.9e-51 206.8 251 51.4
Psat1g024320 Pisum sativum HOM05D001363 ORTHO05D006255 3.3e-51 206.1 242 52.5
Carub.0008s1796 Capsella rubella HOM05D001363 ORTHO05D006255 5.6e-51 205.3 158 60.8
VMungo1383G3248 Vigna mungo HOM05D001363 ORTHO05D006255 7.3e-51 204.9 219 54.3
SHI41748 Sapria himalayana HOM05D001363 ORTHO05D006255 4.7e-50 202.2 185 58.4
Medtr2g445230 Medicago truncatula HOM05D001363 ORTHO05D006255 1.4e-49 200.7 255 49.4
Hund26352 Selenicereus undatus HOM05D001363 ORTHO05D006255 1.4e-49 200.7 185 55.7
Lj6g0018832 Lotus japonicus HOM05D001363 ORTHO05D006255 5.2e-49 198.7 249 51.0
PSO339G0974 Papaver somniferum HOM05D000001 ORTHO05D006255 3.4e-48 196.1 197 55.8
SGA_v2.0_scaffold66G22453 Striga asiatica HOM05D001363 ORTHO05D006255 2.9e-47 193.0 254 49.6
Sabra18G0080300 Salix brachista HOM05D001363 ORTHO05D006255 6.4e-47 191.8 229 49.8
PSO801G0379 Papaver somniferum HOM05D001363 ORTHO05D006255 1.9e-46 190.3 177 58.8
Peaxi162Scf00113g00112 Petunia axillaris HOM05D001363 ORTHO05D006255 3.2e-46 189.5 171 62.6
Peaxi162Scf00276g00065 Petunia axillaris HOM05D001363 ORTHO05D006255 5.4e-46 188.7 171 62.6
SEGI_22217 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.6e-45 187.2 213 47.4
TPR.G9532 Trifolium pratense HOM05D001363 ORTHO05D006255 1.0e-44 184.5 256 48.0
SalBow6G0285 Salvia bowleyana HOM05D001363 ORTHO05D006255 2.3e-44 183.3 202 54.0
unitig_0.g574 Utricularia gibba HOM05D001363 ORTHO05D006255 3.0e-44 183.0 222 46.4
Oeu002544.1 Olea europaea HOM05D001363 ORTHO05D006255 1.1e-41 174.5 184 56.5
Zm00001eb243950 Zea mays HOM05D001363 ORTHO05D006255 2.9e-39 166.4 252 46.0
Os02g0562100 Oryza sativa ssp. japonica HOM05D001363 ORTHO05D006255 1.9e-38 163.7 251 44.2
HPP92_010750 Vanilla planifolia HOM05D001363 ORTHO05D006255 2.4e-38 163.3 257 43.2
Mapoly0009s0225 Marchantia polymorpha HOM05D001363 ORTHO05D006255 3.9e-36 156.0 198 47.0
CBR_g28512 Chara braunii HOM05D001363 ORTHO05D006255 2.1e-34 150.2 196 42.3
Lalb_Chr11g0072311 Lupinus albus HOM05D001363 ORTHO05D006255 2.8e-34 149.8 129 62.8
SalBow7G1126 Salvia bowleyana HOM05D001363 ORTHO05D006255 2.0e-32 143.7 196 42.9
Prupe.1G061700 Prunus persica HOM05D001363 ORTHO05D006255 5.4e-30 135.6 185 47.0
SalBow1G6812 Salvia bowleyana HOM05D001363 ORTHO05D006255 2.1e-29 133.7 215 40.9
SalBow3G2957 Salvia bowleyana HOM05D001363 ORTHO05D006255 1.0e-28 131.3 156 46.2
BcaC01g06492 Brassica carinata HOM05D001363 ORTHO05D006255 1.7e-28 130.6 222 39.6
SalBow3G2802 Salvia bowleyana HOM05D001363 ORTHO05D006255 1.9e-27 127.1 255 35.7
SalBow3G3288 Salvia bowleyana HOM05D001363 ORTHO05D006255 9.6e-27 124.8 156 45.5
MCO13G404 Micromonas commoda HOM05D001363 ORTHO05D006255 1.1e-22 111.3 225 34.2
Cre06.g278151 Chlamydomonas reinhardtii HOM05D001363 ORTHO05D006255 2.4e-22 110.2 177 39.0
PRCOL_00002213 Prasinoderma coloniale HOM05D001363 ORTHO05D006255 7.1e-22 108.6 182 37.9
EL10Ac8g19301 Beta vulgaris HOM05D001363 ORTHO05D006255 2.1e-21 107.1 240 32.5
EL10Ac9g22685 Beta vulgaris HOM05D014025 ORTHO05D006255 4.6e-21 105.9 253 33.6
EL10Ac4g08159 Beta vulgaris HOM05D001363 ORTHO05D006255 1.7e-20 104.0 190 35.8
EL10Ac7g15946 Beta vulgaris HOM05D014025 ORTHO05D006255 3.0e-20 103.2 191 35.1
EL10Ac7g18135 Beta vulgaris HOM05D014025 ORTHO05D006255 9.6e-19 98.2 191 34.0
EL10Ac2g02973 Beta vulgaris HOM05D008320 ORTHO05D012961 1.3e-18 97.8 169 35.5
SMO270G0051 Selaginella moellendorffii HOM05D027465 ORTHO05D006255 4.8e-18 95.9 169 37.3
EL10As3g23308 Beta vulgaris HOM05D001363 ORTHO05D006255 6.2e-18 95.5 152 36.2
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 3.1e-17 93.2 131 47.3
EL10Ac4g08201 Beta vulgaris HOM05D001363 ORTHO05D006255 4.0e-17 92.8 221 27.6
EL10Ac1g01763 Beta vulgaris HOM05D001363 ORTHO05D006255 5.3e-17 92.4 187 32.1
EL10Ac4g09496 Beta vulgaris HOM05D001363 ORTHO05D006255 7.6e-16 88.6 251 29.5
EL10Ac9g22649 Beta vulgaris HOM05D001363 ORTHO05D006255 8.4e-15 85.1 205 29.3
RcHm_v2.0_Chr4g0402521 Rosa chinensis HOM05D001363 ORTHO05D006255 8.4e-15 85.1 82 57.3
EL10Ac1g01702 Beta vulgaris HOM05D001363 ORTHO05D006255 1.9e-14 84.0 251 28.7
EL10Ac5g12481 Beta vulgaris HOM05D014025 ORTHO05D006255 5.1e-12 75.9 128 36.7
EL10Ac3g06723 Beta vulgaris HOM05D001363 ORTHO05D006255 1.9e-11 73.9 251 27.1
EL10Ac1g01411 Beta vulgaris HOM05D001363 ORTHO05D006255 4.3e-11 72.8 117 35.0
EL10Ac3g06993 Beta vulgaris HOM05D014025 ORTHO05D006255 1.6e-10 70.9 119 36.1
EL10Ac4g08765 Beta vulgaris HOM05D014025 ORTHO05D006255 3.6e-10 69.7 109 33.0
EL10Ac3g06329 Beta vulgaris HOM05D001363 ORTHO05D006255 1.5e-08 64.3 103 36.9
unitig_0.g1301 Utricularia gibba HOM05D001546 ORTHO05D008648 4.5e-08 62.8 158 29.1
Pp3c5_12400 Physcomitrium patens HOM05D001546 ORTHO05D008648 5.8e-08 62.4 181 28.2
AUR62036755 Chenopodium quinoa HOM05D009432 ORTHO05D011319 1.3e-07 61.2 127 27.6
Hma1.2p1_0861F.1_g229670 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 2.2e-07 60.5 217 29.5
Hma1.2p1_0861F.1_g229675 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 2.2e-07 60.5 217 29.5
MCO10G289 Micromonas commoda HOM05D007288 ORTHO05D009200 8.4e-07 58.5 193 28.0
AUR62037066 Chenopodium quinoa HOM05D008448 ORTHO05D138146 1.4e-06 57.8 171 28.7
Cre01.g025300 Chlamydomonas reinhardtii HOM05D007288 ORTHO05D009200 4.2e-06 56.2 121 32.2
AagrBONN_evm.TU.Sc2ySwM_362.1271 Anthoceros agrestis HOM05D001363 ORTHO05D002212 5.5e-06 55.8 149 31.5
Cre14.g622850 Chlamydomonas reinhardtii HOM05D001363 ORTHO05D002212 9.3e-06 55.1 149 28.9


User provided reference genes

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