Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019294 Camellia sinensis var. sinensis HOM05D007384 ORTHO05D008511 6.3e-88 327.4 165 100.0
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 4.3e-20 102.1 85 62.4
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 6.2e-19 98.2 85 64.7
Rhsim08G0006700 Rhododendron simsii HOM05D007384 ORTHO05D008511 2.9e-16 89.4 83 57.8
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 3.5e-14 82.4 87 56.3
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 5.1e-13 78.6 79 53.2
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 5.6e-12 75.1 83 51.8
DCAR_001367 Daucus carota HOM05D007384 ORTHO05D008511 9.6e-12 74.3 66 57.6
Duzib147G1655 Durio zibethinus HOM05D007384 ORTHO05D008511 2.1e-11 73.2 84 52.4
ECA238G3631 Erigeron canadensis HOM05D007384 ORTHO05D008511 4.8e-11 72.0 75 45.3
Atru.chr4.403 Acer truncatum HOM05D007384 ORTHO05D008511 9.0e-10 67.8 83 44.6
Sopen04g023570 Solanum pennellii HOM05D007384 ORTHO05D008511 9.0e-10 67.8 75 52.0
Nitab4.5_0000471g0140 Nicotiana tabacum HOM05D007384 ORTHO05D008511 1.2e-09 67.4 76 48.7
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 4.5e-09 65.5 75 50.7
EL10Ac6g14748 Beta vulgaris HOM05D007384 ORTHO05D008511 1.3e-08 63.9 80 42.5
TWI74G0307 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 1.3e-08 63.9 100 42.0
arahy.Tifrunner.gnm1.ann1.AK8RBW Arachis hypogaea HOM05D007384 ORTHO05D008511 2.2e-08 63.2 80 48.8
arahy.Tifrunner.gnm1.ann1.XNBA0B Arachis hypogaea HOM05D007384 ORTHO05D008511 2.2e-08 63.2 80 48.8
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 2.2e-08 63.2 100 42.0
Oeu056489.1 Olea europaea HOM05D007384 ORTHO05D008511 2.9e-08 62.8 89 44.9
Hund03542 Selenicereus undatus HOM05D007384 ORTHO05D008511 2.9e-08 62.8 87 42.5
Oeu028376.1 Olea europaea HOM05D007384 ORTHO05D008511 3.8e-08 62.4 86 41.9
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 4.9e-08 62.0 73 47.9
Oeu028378.1 Olea europaea HOM05D007384 ORTHO05D008511 4.9e-08 62.0 86 40.7
TAR628G0188 Trochodendron aralioides HOM05D007384 ORTHO05D008511 2.5e-07 59.7 84 39.3
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 3.2e-07 59.3 75 48.0
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 4.2e-07 58.9 92 41.3
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 5.5e-07 58.5 87 42.5
Lalb_Chr07g0184821 Lupinus albus HOM05D007384 ORTHO05D008511 5.5e-07 58.5 86 45.3
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 7.1e-07 58.2 68 52.9
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 7.1e-07 58.2 68 52.9
TAR520G0001 Trochodendron aralioides HOM05D007384 ORTHO05D008511 7.1e-07 58.2 84 38.1
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 1.2e-06 57.4 87 42.5
MD01G1019000 Malus domestica HOM05D007384 ORTHO05D008511 2.1e-06 56.6 75 52.0
Manes.12G142100 Manihot esculenta HOM05D007384 ORTHO05D008511 2.1e-06 56.6 83 44.6
Oeu056487.1 Olea europaea HOM05D007384 ORTHO05D008511 2.1e-06 56.6 87 41.4
Hund19659 Selenicereus undatus HOM05D007384 ORTHO05D008511 2.1e-06 56.6 74 47.3
Prupe.6G173600 Prunus persica HOM05D007384 ORTHO05D008511 2.7e-06 56.2 98 39.8
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 3.5e-06 55.8 101 40.6
SGA_v2.0_scaffold47G17711 Striga asiatica HOM05D007384 ORTHO05D008511 4.6e-06 55.5 87 39.1
Ah.02g124370 Amaranthus hybridus HOM05D007384 ORTHO05D008511 6.0e-06 55.1 70 44.3
SalBow6G3892 Salvia bowleyana HOM05D007384 ORTHO05D008511 6.0e-06 55.1 52 46.2
Gorai.011G111700 Gossypium raimondii HOM05D007384 ORTHO05D008511 7.9e-06 54.7 87 41.4


User provided reference genes

Program Settings