Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.4e-118 427.9 213 100.0
CSS0033631 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 1.4e-58 230.3 197 67.5
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-26 122.9 98 60.2
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.3e-20 102.8 100 47.0
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.3e-20 102.8 100 47.0
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 1.4e-18 97.4 99 48.5
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 1.8e-18 97.1 95 47.4
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 8.9e-18 94.7 78 56.4
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-17 93.6 94 50.0
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-16 90.9 97 49.5
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.3e-16 90.9 97 49.5
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.2e-16 90.1 97 49.5
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.7e-16 89.4 97 49.5
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 8.3e-16 88.2 97 47.4
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.0e-15 85.1 96 43.8
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.6e-14 84.0 95 42.1
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.6e-14 84.0 95 46.3
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.0e-14 83.6 99 46.5
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.7e-14 83.2 95 46.3
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.7e-14 83.2 95 46.3
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.7e-14 83.2 97 42.3
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.5e-14 82.8 96 44.8
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.5e-14 82.8 95 46.3
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.6e-14 82.4 122 38.5
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.3e-13 80.9 100 41.0
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.7e-13 80.5 83 51.8
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-13 80.5 85 47.1
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 3.0e-13 79.7 89 47.2
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.9e-13 79.3 89 41.6
Rhsim01G0064200 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.0e-13 79.0 71 54.9
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 6.6e-13 78.6 83 44.6
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-12 77.8 122 36.9
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.1e-12 77.8 83 44.6
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.1e-12 77.8 95 42.1
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.5e-12 77.4 96 43.8
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 1.9e-12 77.0 108 38.0
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.9e-12 77.0 83 43.4
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.9e-12 77.0 96 39.6
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 2.5e-12 76.6 85 44.7
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 9.5e-12 74.7 97 41.2
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 4.7e-11 72.4 97 41.2
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.2e-11 72.0 100 39.0
Rhsim03G0129900 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.4e-10 70.9 69 46.4
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-10 69.7 69 49.3
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.0e-10 69.3 71 49.3
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 5.2e-10 68.9 97 41.2
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.9e-10 68.2 57 59.6
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-09 67.8 82 43.9
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.5e-09 67.4 108 37.0
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.8e-09 64.7 96 36.5
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.8e-09 64.7 94 39.4
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 9.8e-09 64.7 79 35.4
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.3e-08 61.6 99 33.3
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 1.4e-07 60.8 94 35.1
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 3.2e-07 59.7 99 35.4
CSS0016507 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.1e-07 59.3 97 34.0
vmacro13033 Vaccinium macrocarpon HOM05D000076 ORTHO05D007254 4.1e-07 59.3 97 35.1
CSS0044445 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 1.6e-06 57.4 68 42.6
vmacro18048 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 3.5e-06 56.2 79 40.5
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 7.8e-06 55.1 126 26.2
Lj4C77T3 Lonicera japonica HOM05D008183 ORTHO05D007254 7.8e-06 55.1 125 30.4


User provided reference genes

Program Settings