Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.3e-213 745.3 387 100.0
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.1e-182 642.5 387 79.8
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 5.1e-173 611.3 388 76.0
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 6.3e-171 604.4 389 79.2
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 1.7e-168 596.3 392 75.3
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.7e-160 569.7 388 71.1
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 3.6e-158 562.0 387 70.8
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 4.7e-158 561.6 388 70.4
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 3.9e-157 558.5 395 68.1
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 1.5e-156 556.6 389 69.7
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 2.0e-156 556.2 395 70.9
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 9.7e-156 553.9 389 71.7
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 1.3e-155 553.5 388 72.7
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 6.3e-155 551.2 388 71.9
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.1e-154 550.4 386 72.3
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 7.0e-154 547.7 390 74.9
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 4.5e-153 545.0 388 68.3
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 1.7e-152 543.1 420 65.2
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 2.2e-152 542.7 388 68.0
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.9e-152 542.3 384 68.8
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 4.2e-151 538.5 386 70.5
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 6.1e-150 534.6 387 68.7
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 8.8e-149 530.8 388 66.5
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 1.7e-147 526.6 372 73.1
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 4.8e-147 525.0 393 65.6
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 6.3e-147 524.6 389 65.8
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 8.2e-147 524.2 388 66.8
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 1.4e-146 523.5 389 67.1
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 3.1e-146 522.3 385 65.2
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 4.1e-146 521.9 385 64.9
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.6e-145 520.0 396 70.2
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 1.6e-145 520.0 384 66.1
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 1.6e-145 520.0 384 66.1
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 2.0e-145 519.6 392 65.8
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 4.5e-145 518.5 389 65.6
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 1.0e-144 517.3 391 65.2
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 1.3e-144 516.9 377 70.6
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.3e-144 516.9 382 66.5
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 2.2e-144 516.2 392 64.0
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 2.2e-144 516.2 392 62.2
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 5.0e-144 515.0 390 64.1
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 5.0e-144 515.0 371 73.6
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.1e-143 513.8 385 72.2
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.5e-143 513.5 390 70.5
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 1.9e-143 513.1 383 64.8
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 2.5e-143 512.7 442 59.0
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 7.2e-143 511.1 389 66.1
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 2.7e-142 509.2 394 62.9
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 4.7e-142 508.4 392 62.0
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 8.0e-142 507.7 387 65.4
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 2.3e-141 506.1 383 64.0
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 3.0e-141 505.8 393 66.9
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 4.0e-141 505.4 391 64.5
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 3.4e-140 502.3 388 63.7
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 2.2e-139 499.6 389 63.0
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 2.8e-139 499.2 389 69.2
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 6.3e-139 498.0 392 63.0
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 8.3e-139 497.7 440 58.2
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 8.3e-139 497.7 393 63.9
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.1e-138 497.3 392 63.5
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 1.1e-138 497.3 390 64.1
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 1.1e-138 497.3 393 62.6
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 1.8e-138 496.5 393 67.7
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 3.1e-138 495.7 393 69.2
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 5.4e-138 495.0 393 60.8
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 1.2e-137 493.8 403 65.8
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 1.6e-137 493.4 389 65.6
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 1.6e-137 493.4 414 61.8
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 3.5e-137 492.3 387 63.8
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 5.9e-137 491.5 389 62.7
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 5.9e-137 491.5 389 68.1
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 2.3e-136 489.6 341 69.2
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 5.0e-136 488.4 387 63.3
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 3.3e-135 485.7 396 61.1
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 3.3e-135 485.7 387 69.8
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 5.5e-135 485.0 396 64.1
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 5.5e-135 485.0 391 65.0
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 7.2e-135 484.6 427 62.1
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 2.1e-134 483.0 337 70.3
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 2.8e-134 482.6 387 63.3
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 3.0e-133 479.2 389 67.6
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 3.0e-133 479.2 387 66.7
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.4e-132 475.7 388 63.1
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.8e-131 472.6 384 63.0
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 4.9e-131 471.9 388 61.9
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.1e-130 470.7 384 62.8
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 3.5e-129 465.7 323 69.3
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 1.0e-128 464.2 404 60.9
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.3e-128 463.8 390 59.0
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.3e-128 463.8 391 59.1
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 2.3e-128 463.0 388 59.5
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 6.6e-128 461.5 387 62.8
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.9e-127 459.9 389 61.4
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 1.2e-126 457.2 386 59.1
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 8.0e-126 454.5 388 62.4
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 1.8e-125 453.4 384 63.3
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 3.0e-125 452.6 368 63.9
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 8.9e-125 451.1 392 57.4
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 5.8e-124 448.4 385 62.6
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 1.1e-122 444.1 423 58.6
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 4.1e-122 442.2 344 63.4
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 9.5e-119 431.0 340 67.1
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 1.4e-117 427.2 387 56.6
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 6.4e-115 418.3 267 80.5
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 2.3e-112 409.8 403 54.8
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 3.5e-105 386.0 381 52.8
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 4.7e-102 375.6 302 61.3
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 1.8e-101 373.6 271 72.7
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 5.8e-84 315.5 377 51.5
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 7.6e-84 315.1 232 66.4
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.2e-82 309.7 382 49.5
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 4.3e-79 299.3 348 48.9
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 1.1e-77 294.7 277 53.8
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 1.5e-76 290.8 200 70.0
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 6.0e-73 278.9 381 40.4
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 2.8e-70 270.0 226 62.4
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.9e-67 260.0 342 45.0
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.6e-65 254.2 152 75.7
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.7e-57 226.9 324 40.1
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.5e-52 211.1 167 64.7
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 1.2e-49 201.4 233 46.8
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 3.6e-49 199.9 205 48.8
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 2.2e-46 190.7 190 63.2
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 5.0e-43 179.5 139 66.2
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 9.7e-39 165.2 355 32.7
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 1.7e-38 164.5 118 68.6
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 6.5e-27 125.9 349 29.2
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 3.2e-26 123.6 334 29.0
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 5.0e-19 99.8 178 38.2
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.4e-16 91.7 66 68.2
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 7.5e-15 85.9 141 37.6
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 2.2e-14 84.3 148 35.8
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 1.5e-10 71.6 78 53.8
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-10 71.2 69 44.9
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 9.5e-10 68.9 44 81.8


User provided reference genes

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