Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019248 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.4e-68 260.8 123 100.0
CSS0028764 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.5e-28 127.9 63 90.5
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.2e-24 114.0 101 49.5
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-23 111.7 101 49.5
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-23 111.3 99 48.5
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.0e-23 110.5 99 48.5
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-22 110.2 99 48.5
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-22 110.2 99 48.5
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-22 110.2 99 48.5
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-22 110.2 99 48.5
Rhsim05G0112900 Rhododendron simsii HOM05D005012 ORTHO05D005886 7.6e-22 107.5 112 44.6
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-21 106.7 99 46.5
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-21 106.7 99 46.5
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-21 106.7 99 46.5
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.3e-21 106.7 113 47.8
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.9e-21 105.5 101 48.5
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.8e-21 105.1 101 48.5
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.8e-21 105.1 101 48.5
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.4e-20 103.2 114 46.5
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.9e-20 102.8 101 48.5
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.9e-20 102.8 101 48.5
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.9e-20 102.8 101 48.5
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.9e-20 102.8 101 48.5
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.5e-20 102.4 108 44.4
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.5e-20 101.3 99 47.5
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-19 100.1 101 46.5
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.2e-19 100.1 112 43.8
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.6e-19 98.2 101 46.5
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.6e-19 98.2 106 44.3
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.1e-19 97.8 99 45.5
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.9e-19 97.4 101 46.5
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.9e-19 97.4 101 45.5
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 7.4e-17 90.9 98 44.9
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 1.3e-16 90.1 121 38.8
CSS0009064 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-16 89.7 101 43.6
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 8.2e-16 87.4 123 36.6
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 1.1e-15 87.0 115 36.5
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.9e-15 84.3 117 34.2
FAN13G1160 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.9e-15 84.3 117 34.2
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.9e-15 84.3 117 34.2
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.9e-15 84.3 131 32.8
FAN04G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.1e-15 84.0 127 35.4
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.1e-15 84.0 127 35.4
FAN06G3934 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.1e-15 84.0 127 35.4
FAN15G1881 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.1e-15 84.0 127 35.4
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.1e-15 84.0 127 35.4
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 1.2e-14 83.6 119 32.8
FAN04G0818 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.2e-14 83.6 127 35.4
FAN04G2305 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.2e-14 83.6 117 35.0
FAN19G1173 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.0e-14 82.8 117 34.2
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.4e-14 82.0 127 34.6
FAN16G2301 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.4e-14 82.0 117 33.3
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.4e-14 82.0 117 33.3
FvH4_6g21851 Fragaria vesca HOM05D005012 ORTHO05D005886 4.5e-14 81.6 117 33.3
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 1.0e-13 80.5 119 33.6
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.2e-13 79.3 117 32.5
FAN26G2799 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.5e-12 74.7 124 31.5
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.2e-11 73.6 124 32.3
FAN22G1849 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.1e-11 72.8 120 28.3
FAN07G2178 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-11 72.0 109 33.9
FvH4_1g29802 Fragaria vesca HOM05D005012 ORTHO05D005886 4.7e-11 71.6 117 31.6
Rhsim07G0081300 Rhododendron simsii HOM05D000074 ORTHO05D002343 4.7e-11 71.6 82 46.3
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.8e-10 69.7 119 31.1
RcHm_v2.0_Chr3g0475981 Rosa chinensis HOM05D005012 ORTHO05D005886 1.8e-10 69.7 92 38.0
FvH4_5g37421 Fragaria vesca HOM05D005012 ORTHO05D005886 3.0e-10 68.9 105 33.3
FAN26G1690 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.9e-10 68.6 83 38.6
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 3.9e-10 68.6 69 44.9
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-10 67.8 64 46.9
CSS0046965 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-09 67.0 56 51.8
FAN19G1169 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.4e-09 65.1 115 30.4
RcHm_v2.0_Chr2g0138651 Rosa chinensis HOM05D005012 ORTHO05D005886 9.7e-09 63.9 69 42.0
vmacro03774 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 2.2e-08 62.8 74 45.9
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.8e-08 62.4 69 39.1
CSS0034991 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-08 62.0 71 42.3
TWI77G0909 Tripterygium wilfordii HOM05D005012 ORTHO05D005886 3.7e-08 62.0 95 34.7
FvH4_3g22003 Fragaria vesca HOM05D005012 ORTHO05D005886 1.8e-07 59.7 108 28.7
CSS0011556 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.0e-07 57.8 69 36.2
FAN08G2726 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.1e-07 57.4 100 33.0


User provided reference genes

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