Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019220 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 6.5e-238 827.0 422 100.0
CSS0027177 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 3.5e-207 724.9 423 89.1
CSS0034569 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 7.7e-207 723.8 425 86.6
CSS0032936 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 2.0e-186 656.0 422 80.6
CSS0042100 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 7.8e-175 617.5 467 74.9
CSS0023467 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.1e-168 595.1 439 73.3
CSS0019983 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 7.8e-167 590.9 431 76.3
CSS0028975 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.3e-134 483.8 448 63.4
CSS0012880 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 3.1e-91 339.7 308 62.7
CSS0003895 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.2e-90 337.8 308 62.3
CSS0045752 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.7e-89 334.0 307 61.9
CSS0030247 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 6.6e-89 332.0 307 61.9
CSS0018784 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 8.6e-89 331.6 307 61.6
CSS0015520 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.5e-88 330.9 307 61.6
CSS0023629 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.9e-88 330.5 307 60.9
CSS0043466 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 2.5e-88 330.1 307 61.2
CSS0041665 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 4.2e-88 329.3 311 60.1
CSS0012227 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 2.8e-87 326.6 307 60.9
CSS0009559 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.0e-38 163.3 164 62.2
CSS0038372 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D022133 8.5e-12 75.9 139 33.1
CSS0042085 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.1e-11 75.5 158 36.1
CSS0025813 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D022133 1.4e-11 75.1 139 32.4
CSS0032227 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 5.5e-11 73.2 190 34.7
CSS0043873 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 5.5e-11 73.2 190 34.7
CSS0012687 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D001748 7.9e-10 69.3 193 37.3
vmacro20016 Vaccinium macrocarpon HOM05D019504 ORTHO05D022133 3.3e-08 63.9 145 29.0
Rhsim05G0177400 Rhododendron simsii HOM05D000279 ORTHO05D022133 1.3e-07 62.0 155 27.1
Rhsim05G0178500 Rhododendron simsii HOM05D000279 ORTHO05D000957 2.2e-07 61.2 111 31.5
CSS0040721 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D000957 4.8e-07 60.1 165 27.9
Rhsim05G0178600 Rhododendron simsii HOM05D000279 ORTHO05D000957 6.3e-07 59.7 108 29.6


User provided reference genes

Program Settings