Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.1e-63 246.5 127 100.0
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 2.1e-51 205.7 128 84.4
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 2.9e-48 195.3 127 76.4
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.4e-47 192.2 127 76.4
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 2.4e-47 192.2 125 75.2
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.4e-47 192.2 127 76.4
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 9.3e-47 190.3 127 77.2
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 3.5e-46 188.3 127 78.7
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.0e-45 186.8 127 74.8
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 1.3e-45 186.4 127 74.8
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 8.7e-45 183.7 127 74.8
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 1.1e-44 183.3 130 74.6
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.1e-44 183.3 127 71.7
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.5e-44 182.2 127 72.4
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.3e-44 181.8 127 73.2
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 3.3e-44 181.8 128 70.3
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 3.3e-44 181.8 126 72.2
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 4.3e-44 181.4 127 73.2
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 4.3e-44 181.4 127 71.7
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 9.6e-44 180.3 127 70.9
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 2.8e-43 178.7 127 72.4
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 8.1e-43 177.2 127 70.1
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.4e-42 176.4 128 71.1
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 1.4e-42 176.4 128 71.1
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 1.8e-42 176.0 127 70.9
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 2.4e-42 175.6 127 74.8
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.4e-42 175.6 123 75.6
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.4e-42 175.6 123 74.8
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 3.1e-42 175.3 127 70.9
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 4.0e-42 174.9 128 68.0
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 5.3e-42 174.5 128 69.5
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.2e-41 173.3 127 70.9
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 2.0e-41 172.6 141 72.3
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 5.8e-41 171.0 128 72.7
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 5.8e-41 171.0 128 67.2
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 5.8e-41 171.0 143 63.6
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 6.4e-40 167.5 127 66.1
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 6.4e-40 167.5 125 68.0
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.4e-39 166.4 133 67.7
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 3.2e-39 165.2 127 65.4
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 4.2e-39 164.9 127 71.7
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 7.1e-39 164.1 128 67.2
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 7.1e-39 164.1 131 64.9
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 1.2e-38 163.3 127 64.6
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 3.5e-38 161.8 128 68.0
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 7.9e-38 160.6 127 64.6
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 7.9e-38 160.6 127 66.1
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.3e-37 159.8 125 68.0
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 2.3e-37 159.1 129 68.2
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.0e-37 158.7 132 64.4
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 5.1e-37 157.9 127 66.1
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 1.5e-36 156.4 121 68.6
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 1.9e-36 156.0 127 66.1
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 4.3e-36 154.8 124 68.5
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 5.6e-36 154.5 127 66.9
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 9.6e-36 153.7 129 69.0
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.3e-35 153.3 129 64.3
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 1.6e-35 152.9 127 64.6
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 2.1e-35 152.5 128 67.2
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 2.8e-35 152.1 127 63.8
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 6.2e-35 151.0 128 62.5
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 1.2e-33 146.7 127 62.2
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 1.2e-33 146.7 127 63.0
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.5e-33 146.4 127 61.4
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.6e-33 145.6 127 64.6
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 4.5e-33 144.8 127 65.4
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 4.5e-33 144.8 128 64.1
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 9.9e-33 143.7 129 63.6
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.2e-32 142.5 129 63.6
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 2.2e-32 142.5 155 54.2
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 4.9e-32 141.4 128 62.5
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 8.4e-32 140.6 127 59.1
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 1.4e-31 139.8 108 66.7
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.9e-31 139.4 128 60.9
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 1.9e-31 139.4 128 60.9
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 2.4e-31 139.0 127 61.4
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 3.2e-31 138.7 120 60.8
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 4.2e-31 138.3 128 60.2
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 7.1e-31 137.5 120 60.0
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 7.1e-31 137.5 122 61.5
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.6e-30 136.3 117 65.0
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 2.7e-30 135.6 128 58.6
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 2.7e-30 135.6 122 61.5
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 2.7e-30 135.6 122 60.7
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 4.6e-30 134.8 127 60.6
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 6.0e-30 134.4 154 51.9
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 6.0e-30 134.4 127 55.1
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 7.9e-30 134.0 122 63.9
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.0e-29 133.7 121 65.3
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 1.3e-29 133.3 120 56.7
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 2.3e-29 132.5 122 60.7
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 5.1e-29 131.3 120 56.7
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 3.3e-28 128.6 127 55.9
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 7.4e-28 127.5 129 53.5
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 7.4e-28 127.5 129 58.1
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 7.4e-28 127.5 122 59.8
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.1e-26 122.1 127 55.9
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 4.0e-26 121.7 127 52.0
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 2.6e-25 119.0 126 53.2
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 2.6e-25 119.0 127 55.1
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.4e-25 118.6 128 54.7
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.3e-24 116.7 129 51.2
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 4.9e-24 114.8 116 56.0
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 5.5e-23 111.3 130 46.9
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 7.1e-23 110.9 131 52.7
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 9.3e-23 110.5 126 51.6
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 1.2e-22 110.2 127 49.6
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 3.5e-22 108.6 77 74.0
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 4.6e-22 108.2 117 54.7
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.0e-21 107.1 125 49.6
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 1.0e-21 107.1 124 49.2
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 1.8e-21 106.3 125 51.2
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 1.8e-21 106.3 120 51.7
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.3e-21 105.9 101 58.4
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 3.0e-21 105.5 120 51.7
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 3.9e-21 105.1 120 51.7
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 3.9e-21 105.1 124 53.2
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 5.1e-21 104.8 120 50.8
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 1.5e-20 103.2 124 50.0
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 2.5e-20 102.4 127 48.8
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 2.5e-20 102.4 120 50.0
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 3.3e-20 102.1 120 50.0
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 4.3e-20 101.7 120 51.7
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 7.4e-20 100.9 125 48.0
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 7.4e-20 100.9 120 50.8
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 9.7e-20 100.5 116 49.1
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 9.7e-20 100.5 121 46.3
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 2.2e-19 99.4 125 47.2
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 1.4e-18 96.7 124 47.6
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 1.4e-18 96.7 117 46.2
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 3.1e-18 95.5 123 46.3
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 3.1e-18 95.5 123 46.3
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 5.3e-18 94.7 120 47.5
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 5.3e-18 94.7 120 47.5
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 1.7e-16 89.7 107 51.4
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 2.9e-16 89.0 118 47.5
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 2.5e-15 85.9 92 54.3
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 5.5e-15 84.7 86 58.1
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 2.7e-14 82.4 114 47.4
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 3.6e-14 82.0 125 40.8
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 6.1e-14 81.3 54 72.2
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 6.1e-14 81.3 54 72.2
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 7.9e-14 80.9 109 47.7
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 1.8e-13 79.7 118 46.6
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 3.9e-13 78.6 129 39.5
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 5.1e-13 78.2 121 42.1
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 5.1e-13 78.2 85 50.6
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 2.5e-12 75.9 115 43.5
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.5e-12 75.9 115 44.3
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.3e-12 75.5 115 43.5
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 5.7e-12 74.7 132 39.4
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 7.4e-12 74.3 115 43.5
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 7.4e-12 74.3 115 43.5
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 1.3e-11 73.6 78 57.7
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 2.6e-09 65.9 116 41.4
Peaxi162Scf00462g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 1.0e-08 63.9 76 53.9
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 6.5e-08 61.2 47 63.8
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.2e-07 58.5 46 58.7
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 9.4e-07 57.4 121 32.2
Rhsim06G0095600 Rhododendron simsii HOM05D003225 ORTHO05D338509 3.6e-06 55.5 52 61.5


User provided reference genes

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