Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019149 Camellia sinensis var. sinensis HOM05D003912 ORTHO05D004409 2.6e-193 678.7 378 100.0
Dinv27232 Davidia involucrata HOM05D003912 ORTHO05D004409 3.4e-44 183.3 155 64.5
CSS0014108 Camellia sinensis var. sinensis HOM05D003912 ORTHO05D004409 1.6e-41 174.5 157 61.8
Hma1.2p1_1407F.1_g281410 Hydrangea macrophylla HOM05D003912 ORTHO05D004409 1.9e-39 167.5 156 61.5
Lj6C552G3 Lonicera japonica HOM05D003912 ORTHO05D004409 3.1e-37 160.2 152 57.9
Hma1.2p1_0187F.1_g082300 Hydrangea macrophylla HOM05D003912 ORTHO05D004409 2.0e-36 157.5 158 57.0
Rhsim02G0058800 Rhododendron simsii HOM05D003912 ORTHO05D004409 7.5e-36 155.6 154 59.7
Prupe.1G008700 Prunus persica HOM05D003912 ORTHO05D004409 1.9e-34 151.0 171 52.6
vmacro15538 Vaccinium macrocarpon HOM05D003912 ORTHO05D004409 2.4e-34 150.6 154 58.4
MD04G1009400 Malus domestica HOM05D003912 ORTHO05D004409 1.0e-32 145.2 157 50.3
TAR633G1099 Trochodendron aralioides HOM05D003912 ORTHO05D004409 2.3e-32 144.1 156 53.8
Potri.017G055600 Populus trichocarpa HOM05D003912 ORTHO05D004409 5.0e-32 142.9 158 50.0
Nitab4.5_0003502g0040 Nicotiana tabacum HOM05D003912 ORTHO05D004409 5.6e-31 139.4 155 52.3
RcHm_v2.0_Chr4g0415171 Rosa chinensis HOM05D003912 ORTHO05D004409 5.6e-31 139.4 156 51.3
Peaxi162Scf00047g00430 Petunia axillaris HOM05D003912 ORTHO05D004409 9.5e-31 138.7 155 48.4
Nitab4.5_0007416g0010 Nicotiana tabacum HOM05D003912 ORTHO05D004409 1.2e-30 138.3 155 49.0
PGSC0003DMG401015759 Solanum tuberosum HOM05D003912 ORTHO05D004409 2.1e-30 137.5 166 49.4
Ciclev10004226m.g Citrus clementina HOM05D003912 ORTHO05D004409 3.6e-30 136.7 153 53.6
FAN22G2235 Fragaria x ananassa HOM05D003912 ORTHO05D004409 3.6e-30 136.7 157 49.7
Hma1.2p1_0383F.1_g140280 Hydrangea macrophylla HOM05D003912 ORTHO05D004409 6.2e-30 136.0 141 58.2
FvH4_4g16490 Fragaria vesca HOM05D003912 ORTHO05D004409 8.1e-30 135.6 157 49.0
FAN12G1567 Fragaria x ananassa HOM05D003912 ORTHO05D004409 8.1e-30 135.6 157 49.0
TAR636G0234 Trochodendron aralioides HOM05D003912 ORTHO05D004409 8.1e-30 135.6 155 51.6
FAN07G1879 Fragaria x ananassa HOM05D003912 ORTHO05D004409 1.1e-29 135.2 157 49.0
Nitab4.5_0006297g0020 Nicotiana tabacum HOM05D003912 ORTHO05D004409 1.1e-29 135.2 155 48.4
TPR.G19333 Trifolium pratense HOM05D003912 ORTHO05D004409 1.1e-29 135.2 166 45.8
Atru.chr4.1691 Acer truncatum HOM05D003912 ORTHO05D004409 1.4e-29 134.8 157 48.4
Solyc09g091930.3 Solanum lycopersicum HOM05D003912 ORTHO05D004409 1.4e-29 134.8 155 47.7
Sopen09g034830 Solanum pennellii HOM05D003912 ORTHO05D004409 1.4e-29 134.8 155 47.7
FAN17G2369 Fragaria x ananassa HOM05D003912 ORTHO05D004409 1.8e-29 134.4 157 48.4
Solyc05g053690.2 Solanum lycopersicum HOM05D003912 ORTHO05D004409 2.3e-29 134.0 166 48.2
CAN.G1635.11 Capsicum annuum HOM05D003912 ORTHO05D004409 3.1e-29 133.7 155 46.5
Potri.001G315600 Populus trichocarpa HOM05D003912 ORTHO05D004409 4.0e-29 133.3 155 49.7
TAR362G1186 Trochodendron aralioides HOM05D003912 ORTHO05D004409 4.0e-29 133.3 155 50.3
PGSC0003DMG400031289 Solanum tuberosum HOM05D003912 ORTHO05D004409 6.8e-29 132.5 155 47.7
Hund18994 Selenicereus undatus HOM05D003912 ORTHO05D004409 2.0e-28 131.0 170 48.2
MD13G1284700 Malus domestica HOM05D003912 ORTHO05D004409 5.8e-28 129.4 155 46.5
Peaxi162Scf00423g00315 Petunia axillaris HOM05D003912 ORTHO05D004409 5.8e-28 129.4 166 47.6
Nitab4.5_0002260g0180 Nicotiana tabacum HOM05D003912 ORTHO05D004409 7.5e-28 129.0 154 48.7
arahy.Tifrunner.gnm1.ann1.2BAE9R Arachis hypogaea HOM05D003912 ORTHO05D004409 1.3e-27 128.3 176 43.8
Thecc.04G203100 Theobroma cacao HOM05D003912 ORTHO05D004409 2.2e-27 127.5 154 49.4
MSTRG.4227 Avicennia marina HOM05D003912 ORTHO05D004409 2.9e-27 127.1 157 48.4
Sabra16G0199600 Salix brachista HOM05D003912 ORTHO05D004409 2.9e-27 127.1 131 54.2
Eucgr.H02776 Eucalyptus grandis HOM05D003912 ORTHO05D004409 3.7e-27 126.7 151 48.3
Ca_16382_v3 Cicer arietinum L. HOM05D003912 ORTHO05D004409 6.4e-27 125.9 171 42.7
QL06p025007 Quercus lobata HOM05D003912 ORTHO05D004409 8.3e-27 125.6 156 46.8
Sc19g0007170 Simmondsia chinensis HOM05D003912 ORTHO05D004409 8.3e-27 125.6 156 49.4
Duzib212G0883 Durio zibethinus HOM05D003912 ORTHO05D004409 1.1e-26 125.2 156 46.8
Cc03_g07890 Coffea canephora HOM05D003912 ORTHO05D004409 1.4e-26 124.8 157 47.8
HanXRQChr01g0022461 Helianthus annuus HOM05D003912 ORTHO05D004409 1.4e-26 124.8 156 45.5
Nn3g20024 Nelumbo nucifera HOM05D003912 ORTHO05D004409 1.4e-26 124.8 154 45.5
Sopen05g032180 Solanum pennellii HOM05D003912 ORTHO05D004409 1.4e-26 124.8 166 45.8
PGR083G0566 Punica granatum HOM05D003912 ORTHO05D004409 3.2e-26 123.6 155 47.1
arahy.Tifrunner.gnm1.ann1.1SB5R1 Arachis hypogaea HOM05D003912 ORTHO05D004409 5.4e-26 122.9 173 41.6
Lsat_1_v5_gn_6_60801 Lactuca sativa HOM05D003912 ORTHO05D004409 9.2e-26 122.1 153 47.1
Sabra17G0047100 Salix brachista HOM05D003912 ORTHO05D004409 2.1e-25 120.9 142 47.2
Sabra17G0049300 Salix brachista HOM05D003912 ORTHO05D004409 2.1e-25 120.9 142 47.2
Psat5g101840 Pisum sativum HOM05D003912 ORTHO05D004409 4.6e-25 119.8 168 41.1
CiPaw.01G120700 Carya illinoinensis HOM05D003912 ORTHO05D004409 7.8e-25 119.0 156 46.8
ClCG05G003290 Citrullus lanatus HOM05D003912 ORTHO05D004409 1.0e-24 118.6 155 43.9
Phvul.001G268800 Phaseolus vulgaris HOM05D003912 ORTHO05D004409 1.0e-24 118.6 170 38.2
CAN.G765.21 Capsicum annuum HOM05D003912 ORTHO05D004409 1.3e-24 118.2 167 45.5
SalBow3G1138 Salvia bowleyana HOM05D003912 ORTHO05D004409 3.9e-24 116.7 155 43.9
Glyma.11G256600 Glycine max HOM05D003912 ORTHO05D004409 5.1e-24 116.3 166 39.8
Manes.15G054100 Manihot esculenta HOM05D003912 ORTHO05D004409 6.6e-24 115.9 152 45.4
MELO3C006310.2 Cucumis melo HOM05D003912 ORTHO05D004409 1.1e-23 115.2 155 41.9
Gohir.D02G124000 Gossypium hirsutum HOM05D003912 ORTHO05D004409 1.5e-23 114.8 154 42.2
Gorai.005G130100 Gossypium raimondii HOM05D003912 ORTHO05D004409 1.5e-23 114.8 154 42.2
CsaV3_3G010910 Cucumis sativus L. HOM05D003912 ORTHO05D004409 1.9e-23 114.4 155 41.3
Gohir.A03G094600 Gossypium hirsutum HOM05D003912 ORTHO05D004409 1.9e-23 114.4 154 42.2
EL10Ac2g03910 Beta vulgaris HOM05D003912 ORTHO05D004409 2.5e-23 114.0 156 45.5
ECA233G4597 Erigeron canadensis HOM05D003912 ORTHO05D004409 2.5e-23 114.0 149 50.3
AUR62020827 Chenopodium quinoa HOM05D003912 ORTHO05D004409 3.3e-23 113.6 125 50.4
Migut.G00711 Erythranthe guttata HOM05D003912 ORTHO05D004409 3.3e-23 113.6 148 44.6
Sed0005652 Sechium edule HOM05D003912 ORTHO05D004409 4.3e-23 113.2 158 44.3
Lj6g0024996 Lotus japonicus HOM05D003912 ORTHO05D004409 5.6e-23 112.8 169 39.1
PSO541G1554 Papaver somniferum HOM05D003912 ORTHO05D004409 7.3e-23 112.5 155 39.4
AUR62018591 Chenopodium quinoa HOM05D003912 ORTHO05D004409 2.1e-22 110.9 158 43.0
DCAR_026615 Daucus carota HOM05D003912 ORTHO05D004409 6.2e-22 109.4 160 41.9
Lsat_1_v5_gn_1_72160 Lactuca sativa HOM05D003912 ORTHO05D004409 6.2e-22 109.4 163 43.6
Nn1g07894 Nelumbo nucifera HOM05D003912 ORTHO05D004409 1.4e-21 108.2 157 45.2
PSO675G6815 Papaver somniferum HOM05D003912 ORTHO05D004409 1.4e-21 108.2 155 38.1
SGA_v2.0_scaffold626G53246 Striga asiatica HOM05D003912 ORTHO05D004409 1.4e-21 108.2 153 41.8
TAR365G1117 Trochodendron aralioides HOM05D003912 ORTHO05D004409 2.4e-21 107.5 152 44.7
Sed0023360 Sechium edule HOM05D003912 ORTHO05D004409 5.2e-21 106.3 157 43.3
Manes.03G147300 Manihot esculenta HOM05D003912 ORTHO05D004409 6.8e-21 105.9 154 44.8
THA.LOC104801027 Tarenaya hassleriana HOM05D003912 ORTHO05D004409 4.4e-20 103.2 155 40.0
Lalb_Chr08g0230331 Lupinus albus HOM05D003912 ORTHO05D004409 1.7e-19 101.3 196 35.7
THA.LOC104826119 Tarenaya hassleriana HOM05D003912 ORTHO05D004409 6.4e-19 99.4 154 39.0
Haze_11613 Corylus avellana HOM05D003912 ORTHO05D004409 1.1e-18 98.6 240 30.0
Aqoxy2G03850 Aquilegia oxysepala HOM05D003912 ORTHO05D004409 3.2e-18 97.1 160 38.8
GSVIVG01021053001 Vitis vinifera HOM05D003912 ORTHO05D004409 9.2e-18 95.5 150 42.7
A08p36670 Brassica napus HOM05D003912 ORTHO05D004409 3.5e-17 93.6 149 38.3
BraA08t35570Z Brassica rapa HOM05D003912 ORTHO05D004409 3.5e-17 93.6 149 38.3
AT1G04860 Arabidopsis thaliana HOM05D003912 ORTHO05D004409 1.3e-16 91.7 153 34.6
Thhalv10006716m.g Eutrema salsugineum HOM05D003912 ORTHO05D004409 1.3e-16 91.7 152 38.2
TWI09G1517 Tripterygium wilfordii HOM05D003912 ORTHO05D004409 1.3e-16 91.7 251 30.3
BcaB03g13468 Brassica carinata HOM05D003912 ORTHO05D004409 2.3e-16 90.9 155 36.1
Aa31LG1G19870 Aethionema arabicum HOM05D003912 ORTHO05D004409 6.6e-16 89.4 149 36.2
Glyma.18G000500 Glycine max HOM05D003912 ORTHO05D004409 6.6e-16 89.4 91 50.5
TWI09G0574 Tripterygium wilfordii HOM05D003912 ORTHO05D004409 8.7e-16 89.0 251 29.5
TWI73G0783 Tripterygium wilfordii HOM05D003912 ORTHO05D004409 1.1e-15 88.6 249 30.5
CARHR004250 Cardamine hirsuta HOM05D003912 ORTHO05D004409 2.5e-15 87.4 153 35.3
AL1G14580 Arabidopsis lyrata HOM05D003912 ORTHO05D004409 3.3e-15 87.0 163 33.1
Cpa.g.c36900.1 Carica papaya HOM05D003912 ORTHO05D004409 3.3e-15 87.0 219 32.0
Oeu055784.1 Olea europaea HOM05D003912 ORTHO05D004409 4.3e-15 86.7 79 60.8
BcaC07g36874 Brassica carinata HOM05D003912 ORTHO05D004409 5.6e-15 86.3 155 34.8
C08p01540 Brassica napus HOM05D003912 ORTHO05D004409 5.6e-15 86.3 155 34.8
BcaC07g42157 Brassica carinata HOM05D003912 ORTHO05D004409 9.6e-15 85.5 144 37.5
Actinidia39237 Actinidia chinensis HOM05D003912 ORTHO05D004409 1.6e-14 84.7 197 36.0
C08p52040 Brassica napus HOM05D003912 ORTHO05D004409 1.6e-14 84.7 147 36.1
Medtr3g083600 Medicago truncatula HOM05D003912 ORTHO05D004409 1.6e-14 84.7 79 54.4
Carub.0001s0410 Capsella rubella HOM05D003912 ORTHO05D004409 2.1e-14 84.3 153 33.3
Oeu049032.1 Olea europaea HOM05D003912 ORTHO05D004409 2.1e-14 84.3 79 59.5
A09p67710 Brassica napus HOM05D003912 ORTHO05D004409 4.7e-14 83.2 147 34.7
BraA09t42101Z Brassica rapa HOM05D003912 ORTHO05D004409 4.7e-14 83.2 147 34.7
BolC8t46959H Brassica oleracea HOM05D003912 ORTHO05D004409 6.2e-14 82.8 154 33.1
Sp1g03710 Schrenkiella parvula HOM05D003912 ORTHO05D004409 1.1e-13 82.0 157 33.8
BcaC07g42158 Brassica carinata HOM05D003912 ORTHO05D004409 4.0e-13 80.1 79 51.9
COL.COLO4_20146 Corchorus olitorius HOM05D003912 ORTHO05D004409 2.0e-12 77.8 102 40.2
BolC8t52736H Brassica oleracea HOM05D003912 ORTHO05D004409 9.9e-12 75.5 62 56.5
Actinidia11416 Actinidia chinensis HOM05D003912 ORTHO05D004409 8.4e-11 72.4 170 37.6
Aa31LG5G4440 Aethionema arabicum HOM05D003912 ORTHO05D004409 1.1e-10 72.0 113 39.8
C04p16750 Brassica napus HOM05D003912 ORTHO05D004409 1.1e-10 72.0 140 34.3
A05p12820 Brassica napus HOM05D003912 ORTHO05D004409 4.2e-10 70.1 71 53.5
BraA05t20221Z Brassica rapa HOM05D003912 ORTHO05D004409 4.2e-10 70.1 71 53.5
Carub.0004s1415 Capsella rubella HOM05D003912 ORTHO05D004409 4.2e-10 70.1 70 50.0
ECA248G0878 Erigeron canadensis HOM05D003912 ORTHO05D004409 5.4e-10 69.7 158 33.5
AL4G28230 Arabidopsis lyrata HOM05D003912 ORTHO05D004409 7.1e-10 69.3 139 35.3
BolC4t23225H Brassica oleracea HOM05D003912 ORTHO05D004409 9.3e-10 68.9 141 34.8
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 1.2e-09 68.6 146 31.5
unitig_747.g21697 Utricularia gibba HOM05D003912 ORTHO05D004409 1.2e-09 68.6 173 30.1
AT2G32780 Arabidopsis thaliana HOM05D003912 ORTHO05D004409 4.6e-09 66.6 123 38.2
BcaB01g00970 Brassica carinata HOM05D003912 ORTHO05D004409 8.7e-08 62.4 71 50.7
CDE06G1403 Ceratophyllum demersum HOM05D003912 ORTHO05D004409 1.1e-07 62.0 118 36.4
CARHR126680 Cardamine hirsuta HOM05D003912 ORTHO05D004409 4.3e-07 60.1 75 41.3
Migut.N00208 Erythranthe guttata HOM05D003912 ORTHO05D004409 9.6e-07 58.9 117 30.8
ATR0609G080 Amborella trichopoda HOM05D003912 ORTHO05D004409 2.8e-06 57.4 58 48.3


User provided reference genes

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