Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019125 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.2e-105 383.6 183 100.0
CSS0027562 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-23 112.1 55 90.9
CSS0015876 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-22 109.0 52 92.3
CSS0015647 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-21 105.5 54 88.9
Nn5g30083 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.9e-19 98.2 52 82.7
Nn7g37206 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.6e-18 94.7 52 78.8
Hma1.2p1_0184F.1_g081330 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-17 94.4 52 75.0
RcHm_v2.0_Chr5g0056061 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-17 92.8 54 72.2
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.5e-17 91.7 49 77.6
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 6.5e-17 91.7 49 77.6
Hma1.2p1_0774F.1_g216300 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-16 90.9 52 75.0
Hma1.2p1_0774F.1_g216290 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.2e-16 89.4 48 77.1
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 3.2e-16 89.4 52 71.2
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 2.7e-15 86.3 52 69.2
Nn6g34150 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.5e-15 85.9 48 72.9
RcHm_v2.0_Chr4g0409151 Rosa chinensis HOM05D000002 ORTHO05D000001 1.3e-14 84.0 48 70.8
CSS0014778 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-14 82.8 52 65.4
CSS0017329 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-14 82.4 52 65.4
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-14 82.4 52 65.4
SEGI_07554 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.1e-14 82.0 47 74.5
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-13 80.9 48 68.8
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 1.5e-13 80.5 52 65.4
CSS0017331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-13 79.7 49 79.6
FvH4_3g12332 Fragaria vesca HOM05D000002 ORTHO05D000001 2.5e-13 79.7 49 71.4
FvH4_4g30902 Fragaria vesca HOM05D000002 ORTHO05D000001 2.5e-13 79.7 49 71.4
CSS0027637 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-13 79.3 49 65.3
ECA246G4004 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-13 79.0 50 68.0
FvH4_7g13272 Fragaria vesca HOM05D000002 ORTHO05D000001 9.7e-13 77.8 48 70.8
Sopen01g020600 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-12 77.4 51 60.8
Sopen02g009840 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-12 77.4 51 60.8
Sopen06g007920 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-12 77.4 51 60.8
Sopen12g026370 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-12 77.4 51 60.8
CSS0024117 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-12 75.5 37 91.9
TAR156G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.8e-12 75.5 49 65.3
ECA232G1143 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-11 74.3 48 64.6
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.4e-11 73.9 34 85.3
CSS0016567 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-11 73.6 52 67.3
ECA238G2859 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-11 73.2 46 65.2
Nn1g02200 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.1e-11 72.8 49 65.3
ECA232G0373 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-11 71.6 47 61.7
ECA246G4670 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-11 71.6 47 61.7
ECA233G0922 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-10 70.9 48 66.7
Nn1g09172 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.0e-10 70.1 52 63.5
Sopen09g029100 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-10 70.1 51 56.9
ECA248G2341 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.5e-10 68.9 47 63.8
ECA238G0437 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-10 68.6 47 55.3
ECA233G1773 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-10 68.2 49 59.2
Nn4g25618 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.7e-10 68.2 52 63.5
Nn1g08060 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-09 67.4 35 71.4
ECA248G1333 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-09 66.6 47 63.8
ECA240G1585 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-09 66.2 47 55.3
CSS0024481 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-09 65.9 59 49.2
ECA246G0077 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-09 65.9 47 55.3
ECA246G0354 Erigeron canadensis HOM05D000230 ORTHO05D000176 3.8e-09 65.9 46 58.7
ECA234G3983 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.0e-09 65.5 47 61.7
CSS0000038 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-09 64.7 38 81.6
ECA246G0844 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-09 64.7 47 59.6
ECA233G4132 Erigeron canadensis HOM05D000089 ORTHO05D000001 1.9e-08 63.5 47 48.9
ECA246G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-08 63.5 51 51.0
ECA234G4446 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-08 63.2 43 55.8
ECA247G3331 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-08 63.2 47 51.1
ECA240G3412 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-08 62.8 44 54.5
ECA248G1474 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-08 62.4 48 50.0
CSS0007079 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-08 61.2 48 58.3
ECA234G3833 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.4e-08 61.2 44 52.3
QL09p034601 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-07 60.8 33 75.8
Nn1g02566 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.6e-07 60.5 50 58.0
VMungo1383G2365 Vigna mungo HOM05D000306 ORTHO05D000410 1.6e-07 60.5 58 48.3
Hma1.2p1_1768F.1_g301590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-07 60.1 50 50.0
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-07 60.1 51 56.9
ECA233G2170 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-07 59.7 46 52.2
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.7e-07 59.7 50 50.0
Manes.10G112229 Manihot esculenta HOM05D000002 ORTHO05D000001 2.7e-07 59.7 46 60.9
Lalb_Chr10g0097361 Lupinus albus HOM05D000002 ORTHO05D000001 3.6e-07 59.3 75 40.0
ECA248G1506 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 57.4 36 66.7
Hma1.2p1_2049F.1_g312480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-06 57.4 48 54.2
ECA240G2424 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 57.0 47 44.7
CSS0049429 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.8e-06 54.7 49 49.0


User provided reference genes

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