Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.2e-112 410.2 258 100.0
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 2.4e-65 253.1 133 94.0
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 2.6e-64 249.6 132 93.2
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.4e-64 249.2 152 86.2
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 6.4e-63 245.0 133 91.0
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.9e-62 243.4 133 90.2
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 2.4e-62 243.0 131 91.6
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 9.3e-62 241.1 149 81.9
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.5e-61 239.2 132 89.4
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 1.0e-60 237.7 133 88.0
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.0e-60 237.7 129 88.4
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 1.3e-60 237.3 133 86.5
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.3e-60 236.5 133 85.7
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 2.3e-60 236.5 133 87.2
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 3.0e-60 236.1 155 77.4
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 3.0e-60 236.1 133 86.5
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 3.9e-60 235.7 155 78.1
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 3.9e-60 235.7 152 79.6
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 3.9e-60 235.7 134 85.8
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 5.1e-60 235.3 152 79.6
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 6.7e-60 235.0 129 88.4
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.5e-59 233.8 128 89.8
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.5e-59 233.8 134 85.8
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 1.5e-59 233.8 129 89.1
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 1.5e-59 233.8 133 86.5
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 1.5e-59 233.8 133 86.5
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 1.5e-59 233.8 129 87.6
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.9e-59 233.4 133 84.2
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 1.9e-59 233.4 129 87.6
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 1.9e-59 233.4 133 85.0
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 2.5e-59 233.0 129 88.4
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 4.3e-59 232.3 132 84.1
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 5.6e-59 231.9 128 88.3
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 5.6e-59 231.9 133 87.2
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 5.6e-59 231.9 129 87.6
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 7.4e-59 231.5 149 79.9
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 9.6e-59 231.1 133 85.7
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 9.6e-59 231.1 129 86.0
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 1.3e-58 230.7 129 86.0
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.3e-58 230.7 129 88.4
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 1.6e-58 230.3 129 86.0
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 2.1e-58 229.9 129 86.0
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 2.1e-58 229.9 133 84.2
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 2.8e-58 229.6 133 84.2
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 2.8e-58 229.6 133 84.2
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 2.8e-58 229.6 133 83.5
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 2.8e-58 229.6 133 84.2
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 8.1e-58 228.0 135 84.4
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 8.1e-58 228.0 129 87.6
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.1e-57 227.6 133 84.2
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 1.8e-57 226.9 133 82.0
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.4e-57 226.5 129 84.5
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 2.4e-57 226.5 133 82.0
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 3.1e-57 226.1 129 86.0
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 3.1e-57 226.1 149 77.9
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 4.0e-57 225.7 129 86.0
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 6.9e-57 224.9 128 84.4
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 9.0e-57 224.6 128 86.7
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 1.2e-56 224.2 133 82.7
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.2e-56 224.2 133 82.7
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.5e-56 223.8 129 85.3
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.5e-56 223.8 144 79.2
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 2.6e-56 223.0 150 77.3
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.4e-56 222.6 133 82.0
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.4e-56 222.6 133 82.0
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 4.5e-56 222.2 128 83.6
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 5.8e-56 221.9 129 82.9
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 7.6e-56 221.5 133 82.0
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 7.6e-56 221.5 129 84.5
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 2.2e-55 219.9 128 82.8
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 4.9e-55 218.8 133 79.7
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 6.5e-55 218.4 129 83.7
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 8.4e-55 218.0 133 78.9
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 8.4e-55 218.0 133 78.9
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 1.9e-54 216.9 133 80.5
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 5.5e-54 215.3 128 82.8
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 1.2e-53 214.2 130 82.3
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 1.2e-53 214.2 133 78.9
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 1.6e-53 213.8 133 77.4
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 4.6e-53 212.2 153 69.9
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 1.3e-52 210.7 128 81.2
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 1.3e-52 210.7 128 81.2
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 1.8e-52 210.3 151 70.9
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 2.3e-52 209.9 149 72.5
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 2.3e-52 209.9 128 81.2
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 3.9e-52 209.1 134 78.4
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 6.7e-52 208.4 128 80.5
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 6.7e-52 208.4 150 68.0
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 8.7e-52 208.0 129 79.8
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 1.9e-51 206.8 128 79.7
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 2.5e-51 206.5 128 79.7
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 9.6e-51 204.5 149 75.2
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 1.3e-50 204.1 134 76.1
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 1.0e-47 194.5 133 74.4
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 6.5e-47 191.8 127 69.3
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 8.7e-44 181.4 129 68.2
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 6.9e-41 171.8 135 59.3
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 1.5e-40 170.6 100 84.0
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 1.1e-38 164.5 128 60.9
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 4.6e-37 159.1 97 80.4
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 9.7e-35 151.4 127 55.9
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.8e-33 147.1 98 71.4
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 5.3e-33 145.6 128 60.2
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.2e-32 144.4 128 60.2
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 1.5e-32 144.1 98 74.5
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 8.5e-31 138.3 138 55.8
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 1.4e-28 131.0 137 46.7
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 1.4e-25 120.9 116 49.1
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.4e-25 120.2 152 48.0
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.3e-23 114.4 113 61.1
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.9e-22 110.5 75 68.0
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 5.7e-19 99.0 55 81.8
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 6.1e-13 79.0 64 60.9
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 3.4e-11 73.2 37 91.9
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 2.2e-10 70.5 75 54.7
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.5e-08 62.8 59 62.7
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 5.9e-08 62.4 37 83.8
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.0e-07 61.6 40 72.5


User provided reference genes

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