Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 2.5e-84 315.5 164 100.0
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.0e-25 119.8 161 49.1
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 4.4e-25 118.6 135 57.0
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 5.4e-23 111.7 161 46.6
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.2e-22 110.5 161 46.0
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 5.6e-20 101.7 133 52.6
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.1e-19 99.8 136 48.5
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 3.6e-19 99.0 162 43.8
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.7e-19 98.6 156 44.9
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.7e-19 98.6 156 44.9
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.8e-18 96.7 160 43.1
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.4e-18 96.3 148 45.9
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 5.2e-18 95.1 138 47.1
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.2e-17 94.0 139 46.0
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.0e-17 93.2 162 43.2
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 2.0e-17 93.2 138 47.1
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 7.6e-17 91.3 166 39.8
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 2.2e-16 89.7 139 46.8
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 3.8e-16 89.0 117 51.3
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 6.4e-16 88.2 115 51.3
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 8.4e-16 87.8 142 45.1
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-15 87.4 136 47.1
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 1.4e-15 87.0 134 42.5
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 2.4e-15 86.3 160 38.8
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 5.4e-15 85.1 77 57.1
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 5.4e-15 85.1 77 57.1
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 5.4e-15 85.1 138 44.2
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 9.2e-15 84.3 108 50.0
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 1.6e-14 83.6 160 38.1
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 2.7e-14 82.8 161 41.0
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.7e-14 82.8 161 41.0
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 2.7e-14 82.8 170 38.2
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 3.5e-14 82.4 108 47.2
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.0e-14 81.6 161 41.0
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 7.8e-14 81.3 111 45.9
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 1.0e-13 80.9 104 49.0
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 1.0e-13 80.9 120 45.0
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.3e-13 80.5 159 40.3
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 1.3e-13 80.5 145 42.1
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 1.7e-13 80.1 133 43.6
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 2.3e-13 79.7 165 37.6
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 3.0e-13 79.3 133 43.6
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 3.0e-13 79.3 133 43.6
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.9e-13 79.0 168 36.9
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 5.1e-13 78.6 133 42.9
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 5.1e-13 78.6 137 42.3
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 5.1e-13 78.6 145 41.4
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 8.7e-13 77.8 144 41.0
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 8.7e-13 77.8 161 39.1
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 8.7e-13 77.8 108 46.3
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 8.7e-13 77.8 108 46.3
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 1.9e-12 76.6 144 41.0
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 2.5e-12 76.3 142 41.5
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 3.3e-12 75.9 163 38.0
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.3e-12 74.7 162 38.9
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.3e-12 74.7 162 38.9
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 9.6e-12 74.3 116 44.0
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 1.2e-11 73.9 168 38.1
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 1.2e-11 73.9 117 42.7
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 1.2e-11 73.9 117 43.6
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.6e-11 73.6 77 51.9
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 2.1e-11 73.2 134 39.6
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 8.1e-11 71.2 134 39.6
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.8e-10 70.1 117 43.6
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 5.2e-10 68.6 134 38.1
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 6.9e-10 68.2 76 52.6
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 6.9e-10 68.2 167 34.7
Peaxi162Scf00074g00091 Petunia axillaris HOM05D011491 ORTHO05D009078 9.0e-10 67.8 117 41.0
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 1.2e-09 67.4 103 40.8
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.2e-09 67.4 133 36.1
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.5e-09 67.0 138 37.7
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.5e-09 67.0 130 36.9
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 1.5e-09 67.0 104 43.3
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 2.6e-09 66.2 94 43.6
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 4.4e-09 65.5 109 43.1
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 4.4e-09 65.5 128 38.3
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 7.6e-09 64.7 117 36.8
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.2e-08 63.2 105 41.0
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 4.9e-08 62.0 117 35.9
MSTRG.25674 Avicennia marina HOM05D007727 ORTHO05D009078 8.4e-08 61.2 125 36.8
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 1.1e-07 60.8 106 37.7
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 2.4e-07 59.7 167 34.1
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 3.2e-07 59.3 135 33.3
Nitab4.5_0002782g0020 Nicotiana tabacum HOM05D011491 ORTHO05D009078 4.2e-07 58.9 101 41.6
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 4.2e-07 58.9 138 34.8
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 7.1e-07 58.2 132 34.1
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 9.3e-07 57.8 105 38.1
PGSC0003DMG400012145 Solanum tuberosum HOM05D011491 ORTHO05D009078 9.3e-07 57.8 138 36.2
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 1.2e-06 57.4 111 40.5
Peaxi162Scf00074g00092 Petunia axillaris HOM05D011491 ORTHO05D009078 1.6e-06 57.0 109 39.4
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 2.1e-06 56.6 81 39.5
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 2.7e-06 56.2 126 32.5
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 3.5e-06 55.8 125 40.0
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 4.6e-06 55.5 127 33.1
Solyc08g082380.1 Solanum lycopersicum HOM05D011491 ORTHO05D009078 4.6e-06 55.5 164 32.9
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 7.8e-06 54.7 123 32.5


User provided reference genes

Program Settings