Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019060 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.8e-64 249.6 173 100.0
CSS0008758 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 6.2e-62 241.1 138 98.6
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 7.1e-58 227.6 151 92.7
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 1.7e-43 179.9 135 77.8
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 3.8e-43 178.7 135 79.3
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 1.8e-40 169.9 148 64.9
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 3.0e-40 169.1 135 74.1
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 1.5e-39 166.8 131 76.3
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 1.3e-38 163.7 135 74.1
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 8.2e-38 161.0 135 66.7
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 1.4e-37 160.2 135 71.9
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 1.4e-37 160.2 135 71.1
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 4.1e-37 158.7 137 70.8
ATR0559G324 Amborella trichopoda HOM05D005729 ORTHO05D007026 5.3e-37 158.3 135 68.9
Aqoxy5G03273 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 5.3e-37 158.3 135 71.1
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 5.3e-37 158.3 135 71.1
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 9.1e-37 157.5 135 70.4
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 9.1e-37 157.5 135 71.1
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 1.2e-36 157.1 135 71.1
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 1.5e-36 156.8 135 71.1
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 2.0e-36 156.4 136 69.9
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 2.6e-36 156.0 135 68.9
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.6e-36 156.0 135 65.9
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.6e-36 156.0 135 65.9
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 2.6e-36 156.0 135 63.7
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 3.4e-36 155.6 135 69.6
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 3.4e-36 155.6 131 73.3
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 4.5e-36 155.2 135 69.6
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 4.5e-36 155.2 134 69.4
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 5.9e-36 154.8 135 65.2
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 5.9e-36 154.8 135 65.2
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 1.0e-35 154.1 135 68.1
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 2.2e-35 152.9 135 69.6
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 2.9e-35 152.5 135 68.9
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 3.8e-35 152.1 135 69.6
Zm00001eb183750 Zea mays HOM05D005729 ORTHO05D007026 6.5e-35 151.4 135 60.0
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 1.1e-34 150.6 135 68.9
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 1.9e-34 149.8 135 67.4
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 1.9e-34 149.8 135 67.4
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 3.2e-34 149.1 133 69.2
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 5.5e-34 148.3 135 67.4
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 7.2e-34 147.9 135 67.4
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 9.4e-34 147.5 135 68.1
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 1.2e-33 147.1 139 63.3
Rhsim08G0039300 Rhododendron simsii HOM05D005729 ORTHO05D007026 1.2e-33 147.1 132 67.4
Zm00001eb246070 Zea mays HOM05D005729 ORTHO05D007026 1.2e-33 147.1 135 58.5
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 1.6e-33 146.7 135 68.9
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 1.6e-33 146.7 135 66.7
Eucgr.G01937 Eucalyptus grandis HOM05D005729 ORTHO05D007026 2.1e-33 146.4 140 65.0
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 2.7e-33 146.0 135 66.7
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 6.1e-33 144.8 135 66.7
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 7.9e-33 144.4 135 66.7
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.4e-32 143.7 135 63.0
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 2.3e-32 142.9 135 66.7
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 5.1e-32 141.7 135 65.9
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.1e-31 140.6 133 63.9
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 2.0e-31 139.8 150 59.3
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 2.0e-31 139.8 135 63.0
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 3.3e-31 139.0 138 64.5
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 5.7e-31 138.3 139 61.2
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 7.4e-31 137.9 137 62.8
PSO478G2072 Papaver somniferum HOM05D005729 ORTHO05D007026 7.4e-31 137.9 135 56.3
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 9.7e-31 137.5 135 65.2
Gorai.001G275800 Gossypium raimondii HOM05D005729 ORTHO05D007026 1.3e-30 137.1 134 65.7
Os02g0595400 Oryza sativa ssp. japonica HOM05D005729 ORTHO05D007026 1.3e-30 137.1 135 60.7
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 1.7e-30 136.7 135 63.7
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 2.8e-30 136.0 135 60.7
MBI07_g07331_MAGBIO Magnolia biondii HOM05D005729 ORTHO05D007026 4.8e-30 135.2 135 63.7
Gohir.A07G232500 Gossypium hirsutum HOM05D005729 ORTHO05D007026 4.5e-28 128.6 118 67.8
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 5.9e-28 128.3 135 60.0
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 7.7e-28 127.9 135 64.4
HPP92_011631 Vanilla planifolia HOM05D005729 ORTHO05D007026 1.3e-27 127.1 135 60.7
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 3.8e-27 125.6 135 60.7
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 5.0e-27 125.2 135 58.5
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 6.5e-27 124.8 135 60.0
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 8.5e-27 124.4 135 59.3
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 8.5e-27 124.4 136 59.6
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 1.5e-26 123.6 138 58.7
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 1.9e-26 123.2 134 59.7
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.9e-26 123.2 135 59.3
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 3.2e-26 122.5 135 57.8
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 4.2e-26 122.1 138 57.2
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 4.2e-26 122.1 138 57.2
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 4.2e-26 122.1 138 57.2
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 4.2e-26 122.1 149 53.7
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 5.5e-26 121.7 134 59.7
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 7.2e-26 121.3 135 59.3
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 9.4e-26 120.9 138 56.5
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 9.4e-26 120.9 138 56.5
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 2.7e-25 119.4 135 58.5
Nitab4.5_0000519g0260 Nicotiana tabacum HOM05D005729 ORTHO05D007026 1.8e-24 116.7 135 57.8
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 5.2e-24 115.2 135 59.3
Pp3c11_25830 Physcomitrium patens HOM05D005729 ORTHO05D007026 1.1e-23 114.0 135 51.1
PSO017G0758 Papaver somniferum HOM05D005729 ORTHO05D007026 3.3e-23 112.5 135 54.8
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 3.3e-23 112.5 116 56.0
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 5.7e-23 111.7 140 52.9
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 7.5e-23 111.3 137 54.0
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 2.2e-22 109.8 135 57.0
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 2.2e-22 109.8 115 55.7
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 3.7e-22 109.0 136 55.1
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 4.8e-22 108.6 137 54.0
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 8.2e-22 107.8 116 54.3
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 3.1e-21 105.9 138 51.4
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 3.1e-21 105.9 138 51.4
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 5.3e-21 105.1 138 51.4
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 5.3e-21 105.1 138 51.4
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 5.3e-21 105.1 138 51.4
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 7.0e-21 104.8 135 55.6
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 1.2e-20 104.0 148 52.0
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 3.5e-20 102.4 134 55.2
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 5.9e-20 101.7 135 53.3
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 3.8e-19 99.0 134 51.5
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 3.8e-19 99.0 138 55.8
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 3.8e-19 99.0 135 54.1
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 3.2e-18 95.9 132 44.7
RcHm_v2.0_Chr6g0295141 Rosa chinensis HOM05D005729 ORTHO05D007026 9.4e-18 94.4 109 56.9
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 1.4e-16 90.5 107 57.9
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 6.8e-16 88.2 87 60.9
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla HOM05D005729 ORTHO05D007026 9.8e-15 84.3 104 54.8
Mapoly0127s0012 Marchantia polymorpha HOM05D005729 ORTHO05D007026 1.7e-14 83.6 135 45.2
Atru.chr5.655 Acer truncatum HOM05D000598 ORTHO05D000480 2.2e-14 83.2 108 56.5
CDE06G2057 Ceratophyllum demersum HOM05D005729 ORTHO05D007026 3.7e-14 82.4 67 64.2
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 3.5e-12 75.9 84 53.6
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 1.3e-11 73.9 84 52.4
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 1.7e-11 73.6 84 52.4
Lalb_Chr14g0364061 Lupinus albus HOM05D005729 ORTHO05D007026 8.5e-11 71.2 59 79.7
Psat4g074600 Pisum sativum HOM05D005729 ORTHO05D007026 1.1e-10 70.9 105 43.8
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 1.5e-10 70.5 79 50.6
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 8.8e-08 61.2 59 57.6
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 2.0e-07 60.1 86 48.8
CBR_g4589 Chara braunii HOM05D005729 ORTHO05D007026 5.7e-07 58.5 103 44.7


User provided reference genes

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