Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 3.4e-169 598.2 292 100.0
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 5.6e-156 554.3 292 90.8
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 4.8e-155 551.2 292 91.4
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 2.2e-152 542.3 290 89.3
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 3.2e-151 538.5 292 88.0
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.2e-151 538.1 292 87.3
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 4.2e-151 538.1 292 87.7
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 1.6e-150 536.2 290 87.9
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 6.0e-150 534.3 292 87.7
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 6.0e-150 534.3 292 87.0
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 1.0e-149 533.5 292 87.3
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 1.0e-149 533.5 292 86.3
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 2.3e-149 532.3 291 87.6
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 5.1e-149 531.2 292 86.6
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 6.6e-149 530.8 292 87.0
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 8.7e-149 530.4 292 86.6
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 1.5e-148 529.6 292 87.3
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 2.5e-148 528.9 292 85.6
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.5e-148 528.9 292 86.3
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 5.6e-148 527.7 280 90.0
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 5.6e-148 527.7 292 87.0
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 7.4e-148 527.3 290 86.6
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 7.4e-148 527.3 292 86.6
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 1.3e-147 526.6 289 87.2
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 2.1e-147 525.8 292 86.3
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 4.8e-147 524.6 292 87.0
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 6.2e-147 524.2 292 84.9
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 1.4e-146 523.1 292 85.6
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.8e-146 522.7 292 86.0
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.8e-146 522.7 292 86.0
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.8e-146 522.7 292 86.3
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 3.1e-146 521.9 288 85.1
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 4.0e-146 521.5 292 86.0
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.0e-146 521.5 292 86.0
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 6.9e-146 520.8 290 83.8
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 6.9e-146 520.8 292 85.3
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 6.9e-146 520.8 294 86.4
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 9.0e-146 520.4 292 85.3
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.5e-145 519.6 288 85.1
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 2.0e-145 519.2 321 78.5
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 2.0e-145 519.2 288 84.7
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.6e-145 518.8 292 85.6
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 9.9e-145 516.9 292 84.2
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 9.9e-145 516.9 292 85.3
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 2.9e-144 515.4 290 85.5
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 4.9e-144 514.6 292 84.6
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.9e-144 514.6 292 84.6
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 6.4e-144 514.2 292 83.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 6.4e-144 514.2 290 83.4
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 8.4e-144 513.8 289 84.1
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 8.4e-144 513.8 292 84.6
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.1e-143 513.5 292 82.9
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.4e-143 513.1 292 84.9
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.9e-143 512.7 288 82.6
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 84.2
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.4e-143 512.3 290 84.8
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 84.9
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 3.2e-143 511.9 287 84.0
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 3.2e-143 511.9 287 84.0
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 3.2e-143 511.9 289 84.8
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.2e-143 511.9 292 83.9
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 5.5e-143 511.1 292 81.5
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 5.5e-143 511.1 290 83.8
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.2e-142 510.0 291 82.5
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 2.1e-142 509.2 290 81.7
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 3.5e-142 508.4 292 81.2
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 6.0e-142 507.7 288 82.3
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 7.9e-142 507.3 290 81.7
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.8e-141 506.1 288 81.9
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 5.1e-141 504.6 292 80.1
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 5.1e-141 504.6 292 80.1
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 6.7e-141 504.2 293 82.6
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 8.7e-141 503.8 292 80.1
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.1e-140 503.4 292 79.8
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.5e-140 503.1 292 79.8
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.5e-140 503.1 288 80.9
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.5e-140 503.1 291 82.5
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 2.5e-140 502.3 292 79.5
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 2.5e-140 502.3 272 89.0
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 3.3e-140 501.9 292 82.9
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 4.3e-140 501.5 288 82.3
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.3e-139 500.0 290 82.1
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 1.3e-139 500.0 291 80.8
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 4.8e-139 498.0 292 79.5
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 4.8e-139 498.0 292 79.8
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 4.8e-139 498.0 292 79.5
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 4.8e-139 498.0 290 80.0
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.1e-138 496.9 292 79.8
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.4e-138 495.7 292 82.5
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 3.1e-138 495.4 274 86.5
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 3.4e-137 491.9 292 77.7
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 3.4e-137 491.9 292 77.7
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 4.5e-137 491.5 292 77.7
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 4.5e-137 491.5 292 77.7
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 4.5e-137 491.5 289 79.2
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 7.6e-137 490.7 287 81.9
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 2.2e-136 489.2 287 78.4
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 2.9e-136 488.8 289 81.3
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.5e-136 487.6 292 82.5
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.4e-135 486.5 272 86.4
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 9.3e-135 483.8 273 85.3
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 3.9e-133 478.4 288 79.9
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 5.1e-133 478.0 278 82.4
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 1.9e-132 476.1 292 80.5
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.6e-131 473.0 292 80.1
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 2.1e-131 472.6 313 76.7
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 2.8e-131 472.2 289 77.9
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 3.7e-131 471.9 251 88.4
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 3.1e-130 468.8 294 74.8
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.1e-122 443.7 287 72.8
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 2.4e-122 442.6 288 73.3
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 6.9e-122 441.0 309 70.2
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.5e-121 439.9 271 79.3
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.0e-117 427.2 281 71.2
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 3.7e-115 418.7 273 72.2
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.5e-113 413.3 267 73.8
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 6.7e-109 397.9 281 65.5
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.0e-105 386.3 225 81.8
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 4.8e-99 365.2 321 62.0
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.3e-91 340.5 191 85.9
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 5.5e-87 325.1 186 85.5
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 5.2e-85 318.5 183 83.6
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 4.4e-84 315.5 285 53.3
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 7.0e-82 308.1 294 54.4
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 2.9e-80 302.8 173 83.8
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 1.6e-78 297.0 188 76.1
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 2.8e-78 296.2 297 53.5
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 2.0e-73 280.0 293 47.4
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.4e-59 231.9 310 45.8
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 6.6e-56 221.9 164 68.3
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.8e-54 216.5 224 54.5
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.2e-52 211.1 221 54.3
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 8.6e-48 194.9 106 85.8
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.4e-45 186.8 101 88.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.0e-45 186.0 102 86.3
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.9e-42 177.2 96 87.5
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 5.6e-31 139.0 76 88.2
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-23 114.8 96 64.6
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 9.6e-23 111.7 164 42.1
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.9e-10 70.9 49 65.3
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 3.6e-09 66.6 40 85.0


User provided reference genes

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