Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019042 Camellia sinensis var. sinensis HOM05D001657 ORTHO05D001557 3.7e-85 318.2 159 100.0
CSS0024506 Camellia sinensis var. sinensis HOM05D001657 ORTHO05D001557 3.7e-37 158.7 113 77.9
Actinidia06967 Actinidia chinensis HOM05D001657 ORTHO05D001557 2.3e-34 149.4 122 65.6
Rhsim13G0209000 Rhododendron simsii HOM05D001657 ORTHO05D001557 2.5e-33 146.0 114 71.1
vmacro04035 Vaccinium macrocarpon HOM05D001657 ORTHO05D001557 2.6e-30 136.0 113 68.1
Rhsim01G0195600 Rhododendron simsii HOM05D001657 ORTHO05D001557 5.1e-26 121.7 114 60.5
Dinv36162 Davidia involucrata HOM05D001657 ORTHO05D001557 1.5e-25 120.2 121 58.7
Lj1A279T27 Lonicera japonica HOM05D001657 ORTHO05D001557 3.1e-23 112.5 115 54.8
Dinv15035 Davidia involucrata HOM05D001657 ORTHO05D001557 2.6e-22 109.4 122 54.1
Hma1.2p1_0859F.1_g229470 Hydrangea macrophylla HOM05D001657 ORTHO05D001557 3.9e-18 95.5 121 52.1
Nn7g36734 Nelumbo nucifera HOM05D001657 ORTHO05D001557 8.7e-18 94.4 127 48.0
GSVIVG01037287001 Vitis vinifera HOM05D001657 ORTHO05D001557 8.7e-18 94.4 126 53.2
TWI79G1672 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 1.3e-16 90.5 127 48.0
Cc01_g05360 Coffea canephora HOM05D001657 ORTHO05D001557 3.6e-16 89.0 113 48.7
TAR623G1416 Trochodendron aralioides HOM05D001657 ORTHO05D001557 8.1e-16 87.8 127 49.6
Sabra09G0052600 Salix brachista HOM05D001657 ORTHO05D001557 3.1e-15 85.9 125 45.6
TWI75G1395 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 3.1e-15 85.9 135 43.0
Nitab4.5_0003488g0070 Nicotiana tabacum HOM05D001657 ORTHO05D001557 4.0e-15 85.5 111 48.6
Potri.009G069700 Populus trichocarpa HOM05D001657 ORTHO05D001557 4.0e-15 85.5 116 47.4
Nitab4.5_0000718g0330 Nicotiana tabacum HOM05D001657 ORTHO05D001557 6.9e-15 84.7 110 48.2
Oeu061708.1 Olea europaea HOM05D001657 ORTHO05D001557 6.9e-15 84.7 110 51.8
Atru.chr3.2890 Acer truncatum HOM05D001657 ORTHO05D001557 1.5e-14 83.6 125 45.6
CAN.G64.13 Capsicum annuum HOM05D001657 ORTHO05D001557 2.0e-14 83.2 111 47.7
QL01p017079 Quercus lobata HOM05D001657 ORTHO05D001557 3.4e-14 82.4 126 43.7
Thecc.09G247900 Theobroma cacao HOM05D001657 ORTHO05D001557 7.6e-14 81.3 124 43.5
Nitab4.5_0001500g0040 Nicotiana tabacum HOM05D001657 ORTHO05D001557 9.9e-14 80.9 111 47.7
MSTRG.21346 Avicennia marina HOM05D001657 ORTHO05D001557 1.3e-13 80.5 121 43.0
Ciclev10017928m.g Citrus clementina HOM05D001657 ORTHO05D001557 1.3e-13 80.5 125 43.2
Potri.001G275200 Populus trichocarpa HOM05D001657 ORTHO05D001557 2.9e-13 79.3 116 44.0
Nitab4.5_0000730g0040 Nicotiana tabacum HOM05D001657 ORTHO05D001557 6.4e-13 78.2 112 45.5
Gohir.D05G075900 Gossypium hirsutum HOM05D001657 ORTHO05D001557 1.4e-12 77.0 124 42.7
Gorai.009G077200 Gossypium raimondii HOM05D001657 ORTHO05D001557 1.4e-12 77.0 124 42.7
DCAR_029989 Daucus carota HOM05D001657 ORTHO05D001557 1.9e-12 76.6 123 43.9
Cpa.g.sc157.59 Carica papaya HOM05D001657 ORTHO05D001557 2.4e-12 76.3 122 45.1
COL.COLO4_32772 Corchorus olitorius HOM05D001657 ORTHO05D001557 3.2e-12 75.9 124 41.9
Duzib150G0200 Durio zibethinus HOM05D001657 ORTHO05D001557 3.2e-12 75.9 124 41.9
MBI13_g12111_MAGBIO Magnolia biondii HOM05D001657 ORTHO05D001557 3.2e-12 75.9 128 40.6
Oeu016697.1 Olea europaea HOM05D001657 ORTHO05D001557 4.2e-12 75.5 110 45.5
Haze_23233 Corylus avellana HOM05D001657 ORTHO05D001557 5.4e-12 75.1 126 40.5
Gorai.013G253500 Gossypium raimondii HOM05D001657 ORTHO05D001557 5.4e-12 75.1 133 39.8
CANSAT54G0751 Cannabis sativa HOM05D001657 ORTHO05D001557 7.1e-12 74.7 125 44.0
Oeu025906.2 Olea europaea HOM05D001657 ORTHO05D001557 9.3e-12 74.3 110 49.1
CiPaw.13G150300 Carya illinoinensis HOM05D001657 ORTHO05D001557 1.2e-11 73.9 125 43.2
Migut.D00665 Erythranthe guttata HOM05D001657 ORTHO05D001557 1.2e-11 73.9 112 46.4
Gohir.A13G218700 Gossypium hirsutum HOM05D001657 ORTHO05D001557 1.2e-11 73.9 133 39.8
Nn2g14794 Nelumbo nucifera HOM05D001657 ORTHO05D001557 1.2e-11 73.9 122 45.1
Gohir.A05G073000 Gossypium hirsutum HOM05D001657 ORTHO05D001557 1.6e-11 73.6 124 41.1
Gohir.D13G222400 Gossypium hirsutum HOM05D001657 ORTHO05D001557 2.7e-11 72.8 133 39.1
Hund07435 Selenicereus undatus HOM05D001657 ORTHO05D001557 2.7e-11 72.8 114 45.6
Cfa009859 Carpinus fangiana HOM05D001657 ORTHO05D001557 3.5e-11 72.4 126 38.9
AUR62006545 Chenopodium quinoa HOM05D001657 ORTHO05D001557 4.6e-11 72.0 112 45.5
Solyc01g008770.3 Solanum lycopersicum HOM05D001657 ORTHO05D001557 6.0e-11 71.6 110 44.5
Sopen01g004280 Solanum pennellii HOM05D001657 ORTHO05D001557 6.0e-11 71.6 110 44.5
Peaxi162Scf00004g04522 Petunia axillaris HOM05D001657 ORTHO05D001557 1.0e-10 70.9 112 44.6
PSO384G1415 Papaver somniferum HOM05D001657 ORTHO05D001557 3.0e-10 69.3 126 38.1
Ah.06g194600 Amaranthus hybridus HOM05D001657 ORTHO05D001557 8.7e-10 67.8 133 36.1
CsaV3_1G043470 Cucumis sativus L. HOM05D001657 ORTHO05D001557 8.7e-10 67.8 159 34.6
Prupe.4G265200 Prunus persica HOM05D001657 ORTHO05D001557 8.7e-10 67.8 125 41.6
Manes.02G139000 Manihot esculenta HOM05D001657 ORTHO05D001557 1.1e-09 67.4 117 42.7
ClCG03G012550 Citrullus lanatus HOM05D001657 ORTHO05D001557 1.5e-09 67.0 125 40.0
PSO339G2819 Papaver somniferum HOM05D001657 ORTHO05D001557 1.5e-09 67.0 126 38.1
Manes.02G138900 Manihot esculenta HOM05D001657 ORTHO05D001557 2.5e-09 66.2 125 40.8
Lalb_Chr17g0347881 Lupinus albus HOM05D001657 ORTHO05D001557 5.6e-09 65.1 124 41.1
Sc09g0001020 Simmondsia chinensis HOM05D001657 ORTHO05D001557 5.6e-09 65.1 123 39.8
ECA233G6044 Erigeron canadensis HOM05D001657 ORTHO05D001557 7.3e-09 64.7 112 41.1
Migut.N02374 Erythranthe guttata HOM05D001657 ORTHO05D001557 7.3e-09 64.7 113 40.7
MSTRG.18463 Avicennia marina HOM05D001657 ORTHO05D001557 9.6e-09 64.3 118 39.0
CAN.G633.7 Capsicum annuum HOM05D001657 ORTHO05D001557 9.6e-09 64.3 111 43.2
Peaxi162Scf00032g02319 Petunia axillaris HOM05D001657 ORTHO05D001557 9.6e-09 64.3 111 40.5
Eucgr.B03736 Eucalyptus grandis HOM05D001657 ORTHO05D001557 2.1e-08 63.2 119 40.3
LjContig00564g0014509 Lotus japonicus HOM05D001657 ORTHO05D001557 2.8e-08 62.8 123 39.0
MELO3C015111.2 Cucumis melo HOM05D001657 ORTHO05D001557 4.8e-08 62.0 126 38.1
MD03G1165400 Malus domestica HOM05D001657 ORTHO05D001557 4.8e-08 62.0 127 39.4
Glyma.14G035400 Glycine max HOM05D001657 ORTHO05D001557 6.2e-08 61.6 125 40.0
AUR62000195 Chenopodium quinoa HOM05D001657 ORTHO05D001557 8.1e-08 61.2 123 40.7
Phvul.008G201400 Phaseolus vulgaris HOM05D001657 ORTHO05D001557 8.1e-08 61.2 126 37.3
Aqoxy1G00368 Aquilegia oxysepala HOM05D001657 ORTHO05D001557 3.1e-07 59.3 127 38.6
Glyma.02G279300 Glycine max HOM05D001657 ORTHO05D001557 3.1e-07 59.3 130 40.0
arahy.Tifrunner.gnm1.ann1.P3YD5X Arachis hypogaea HOM05D001657 ORTHO05D001557 4.0e-07 58.9 122 38.5
arahy.Tifrunner.gnm1.ann1.Q6J55I Arachis hypogaea HOM05D001657 ORTHO05D001557 4.0e-07 58.9 122 38.5
EL10Ac4g10116 Beta vulgaris HOM05D001657 ORTHO05D001557 6.9e-07 58.2 114 41.2
VMungo0647G0415 Vigna mungo HOM05D001657 ORTHO05D001557 1.5e-06 57.0 123 35.8
Sed0002817 Sechium edule HOM05D001657 ORTHO05D001557 2.0e-06 56.6 115 39.1
Psat0ss3759g0080 Pisum sativum HOM05D001657 ORTHO05D001557 7.6e-06 54.7 122 36.1


User provided reference genes

Program Settings