Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.4e-176 622.9 325 100.0
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.0e-142 510.4 325 83.1
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 4.2e-136 488.4 291 86.6
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 4.7e-135 485.0 325 79.4
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 3.7e-132 475.3 322 78.9
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.8e-131 473.0 323 77.1
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.8e-131 473.0 325 76.9
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 3.8e-129 465.3 347 73.8
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 1.9e-128 463.0 325 76.3
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 7.2e-128 461.1 326 75.8
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 6.1e-127 458.0 327 75.5
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 2.3e-126 456.1 323 74.6
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 8.8e-126 454.1 321 75.4
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.8e-124 449.1 324 76.2
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 3.1e-123 445.7 325 72.6
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 5.3e-123 444.9 324 75.3
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 1.2e-122 443.7 328 74.7
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.6e-122 443.4 325 73.8
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 2.0e-122 443.0 324 73.1
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.0e-122 443.0 322 74.5
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 5.9e-122 441.4 326 72.4
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 7.7e-122 441.0 325 72.6
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.0e-121 440.7 329 74.2
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.7e-121 439.9 326 73.0
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.8e-121 438.7 249 90.8
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 5.0e-121 438.3 323 74.3
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 6.5e-121 438.0 327 72.2
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 8.5e-121 437.6 326 72.4
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.5e-120 436.8 329 72.9
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.9e-120 436.4 326 72.4
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.9e-120 436.4 330 73.0
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 2.5e-120 436.0 323 73.7
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 3.2e-120 435.6 326 72.4
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 5.5e-120 434.9 323 73.7
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 4.7e-119 431.8 328 72.0
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 8.0e-119 431.0 327 70.9
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.4e-118 430.3 322 71.7
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 1.8e-118 429.9 325 72.3
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 6.8e-118 427.9 325 71.4
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.2e-117 427.2 321 73.2
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 4.4e-117 425.2 325 72.0
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 7.5e-117 424.5 323 70.6
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 7.5e-117 424.5 327 70.3
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.3e-116 423.7 319 71.2
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 4.8e-116 421.8 322 69.6
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.4e-115 419.5 326 70.2
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 4.1e-115 418.7 326 69.3
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 5.4e-115 418.3 313 72.2
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.0e-114 416.4 326 70.9
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 3.5e-114 415.6 326 69.0
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 4.5e-114 415.2 326 69.6
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 7.7e-114 414.5 331 69.8
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 6.5e-113 411.4 328 68.3
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.5e-112 409.5 316 69.6
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 7.2e-112 407.9 297 71.7
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 1.6e-111 406.8 326 68.4
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.1e-111 406.4 315 69.5
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 6.1e-111 404.8 307 71.0
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 6.1e-111 404.8 298 70.8
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 6.1e-111 404.8 260 79.6
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 6.1e-111 404.8 276 75.4
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 1.4e-110 403.7 334 67.4
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.3e-110 402.9 328 67.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 2.6e-109 399.4 321 67.9
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 2.6e-109 399.4 316 69.3
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 2.6e-109 399.4 297 71.0
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 3.4e-109 399.1 335 65.1
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 3.4e-109 399.1 236 86.9
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 7.5e-109 397.9 300 69.7
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 9.8e-109 397.5 330 67.0
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.3e-108 397.1 285 72.6
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 4.9e-108 395.2 250 81.6
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 4.9e-108 395.2 238 84.9
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 4.9e-108 395.2 289 70.9
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 1.1e-107 394.0 321 66.4
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.1e-107 394.0 260 78.1
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.0e-106 389.8 313 67.1
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 5.9e-106 388.3 321 66.4
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 5.9e-106 388.3 356 62.9
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 7.7e-106 387.9 331 67.4
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.5e-104 382.9 369 59.3
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 3.3e-104 382.5 340 63.5
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 8.0e-103 377.9 348 61.2
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 1.8e-102 376.7 268 69.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 6.8e-102 374.8 277 69.0
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 1.8e-99 366.7 339 60.8
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.8e-99 366.7 250 74.8
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.8e-99 366.7 291 68.4
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 1.9e-96 356.7 308 63.3
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 9.5e-96 354.4 220 85.9
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 4.7e-95 352.1 221 79.6
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 2.6e-93 346.3 235 74.9
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.1e-91 340.9 254 70.9
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.0e-90 336.7 334 58.4
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 1.9e-88 330.1 257 70.4
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 4.1e-83 312.4 216 68.1
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.5e-80 303.9 265 62.6
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 3.3e-80 302.8 261 65.1
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 5.2e-78 295.4 214 74.8
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 5.8e-77 292.0 266 60.5
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 3.0e-73 279.6 327 46.8
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 1.2e-69 267.7 253 52.2
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 4.2e-67 259.2 277 48.4
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.5e-61 240.7 251 48.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.5e-61 240.7 263 46.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.9e-59 233.8 253 49.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.2e-59 232.6 253 47.0
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.1e-59 231.9 249 49.8
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.4e-53 213.0 129 82.9
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.9e-51 207.2 257 43.2
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 8.4e-44 181.8 246 42.7
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 4.6e-42 176.0 123 74.0
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.3e-41 174.5 165 65.5
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 2.8e-39 166.8 246 37.0
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 4.6e-34 149.4 311 38.9
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.5e-24 117.9 244 31.1
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 1.1e-19 101.7 235 30.6
Actinidia30278 Actinidia chinensis HOM05D005233 ORTHO05D006308 4.0e-09 66.6 70 61.4
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 6.7e-09 65.9 84 53.6
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 4.8e-07 59.7 52 55.8
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 8.2e-07 58.9 32 90.6
SEGI_14321 Sequoiadendron giganteum HOM05D006532 ORTHO05D385294 9.1e-06 55.5 88 45.5


User provided reference genes

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