Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019032 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 2.1e-42 175.3 85 100.0
CSS0001831 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.7e-36 155.6 85 91.8
CSS0038017 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.7e-36 155.6 85 91.8
CSS0009940 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.1e-14 83.2 56 75.0
Lalb_Chr23g0268451 Lupinus albus HOM05D003337 ORTHO05D003808 4.6e-10 67.8 57 56.1
Migut.A00028 Erythranthe guttata HOM05D003337 ORTHO05D003808 1.8e-09 65.9 57 54.4
Manes.03G013300 Manihot esculenta HOM05D003337 ORTHO05D003808 2.3e-09 65.5 57 52.6
Oeu053108.1 Olea europaea HOM05D003337 ORTHO05D003808 2.3e-09 65.5 57 54.4
VMungo1309G0140 Vigna mungo HOM05D003337 ORTHO05D003808 2.3e-09 65.5 57 54.4
AUR62012417 Chenopodium quinoa HOM05D003337 ORTHO05D003808 3.0e-09 65.1 57 54.4
Phvul.009G091900 Phaseolus vulgaris HOM05D003337 ORTHO05D003808 3.0e-09 65.1 57 54.4
AUR62031541 Chenopodium quinoa HOM05D003337 ORTHO05D003808 3.9e-09 64.7 57 52.6
Lj7C724G9 Lonicera japonica HOM05D003337 ORTHO05D003808 3.9e-09 64.7 57 54.4
GSVIVG01035878001 Vitis vinifera HOM05D003337 ORTHO05D003808 6.7e-09 63.9 57 52.6
arahy.Tifrunner.gnm1.ann1.C340QI Arachis hypogaea HOM05D003337 ORTHO05D003808 1.1e-08 63.2 57 50.9
arahy.Tifrunner.gnm1.ann1.EV8XFE Arachis hypogaea HOM05D003337 ORTHO05D003808 1.1e-08 63.2 57 50.9
EL10Ac2g04195 Beta vulgaris HOM05D003337 ORTHO05D003808 1.1e-08 63.2 57 52.6
Medtr3g106700 Medicago truncatula HOM05D003337 ORTHO05D003808 1.1e-08 63.2 57 52.6
CiPaw.07G224800 Carya illinoinensis HOM05D003337 ORTHO05D003808 1.5e-08 62.8 57 54.4
Cc08_g00460 Coffea canephora HOM05D003337 ORTHO05D003808 1.5e-08 62.8 56 53.6
COL.COLO4_18879 Corchorus olitorius HOM05D003337 ORTHO05D003808 1.5e-08 62.8 57 52.6
Lalb_Chr08g0244191 Lupinus albus HOM05D003337 ORTHO05D003808 1.5e-08 62.8 57 52.6
MSTRG.26016 Avicennia marina HOM05D003337 ORTHO05D003808 1.9e-08 62.4 55 54.5
SalBow4G0163 Salvia bowleyana HOM05D003337 ORTHO05D003808 1.9e-08 62.4 57 52.6
Ciclev10007238m.g Citrus clementina HOM05D003337 ORTHO05D003808 2.5e-08 62.0 57 50.9
Lj1g0009523 Lotus japonicus HOM05D003337 ORTHO05D003808 2.5e-08 62.0 57 50.9
Manes.16G123500 Manihot esculenta HOM05D003337 ORTHO05D003808 2.5e-08 62.0 57 50.9
unitig_748.g8275 Utricularia gibba HOM05D003337 ORTHO05D003808 2.5e-08 62.0 57 52.6
ClCG05G016760 Citrullus lanatus HOM05D003337 ORTHO05D003808 3.3e-08 61.6 57 52.6
HanXRQChr05g0134851 Helianthus annuus HOM05D003337 ORTHO05D003808 3.3e-08 61.6 54 51.9
Potri.018G025600 Populus trichocarpa HOM05D003337 ORTHO05D003808 3.3e-08 61.6 57 52.6
Aqoxy7G02409 Aquilegia oxysepala HOM05D003337 ORTHO05D003808 4.3e-08 61.2 55 50.9
MBI14_g37827_MAGBIO Magnolia biondii HOM05D003337 ORTHO05D003808 4.3e-08 61.2 55 52.7
Nn8g39563 Nelumbo nucifera HOM05D003337 ORTHO05D003808 4.3e-08 61.2 56 53.6
Psat5g029560 Pisum sativum HOM05D003337 ORTHO05D003808 4.3e-08 61.2 57 50.9
Hund25887 Selenicereus undatus HOM05D003337 ORTHO05D003808 4.3e-08 61.2 57 54.4
SGA_v2.0_scaffold64G21955 Striga asiatica HOM05D003337 ORTHO05D003808 4.3e-08 61.2 57 50.9
TAR636G2033 Trochodendron aralioides HOM05D003337 ORTHO05D003808 4.3e-08 61.2 57 52.6
vmacro11183 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 4.3e-08 61.2 57 52.6
Ah.16g104580 Amaranthus hybridus HOM05D003337 ORTHO05D003808 5.7e-08 60.8 57 50.9
Duzib168G1956 Durio zibethinus HOM05D003337 ORTHO05D003808 5.7e-08 60.8 57 50.9
Glyma.04G065500 Glycine max HOM05D003337 ORTHO05D003808 5.7e-08 60.8 57 49.1
TPR.G3117 Trifolium pratense HOM05D003337 ORTHO05D003808 5.7e-08 60.8 57 50.9
Cpa.g.sc217.15 Carica papaya HOM05D003337 ORTHO05D003808 7.4e-08 60.5 56 51.8
Haze_21497 Corylus avellana HOM05D003337 ORTHO05D003808 7.4e-08 60.5 57 52.6
DCAR_001543 Daucus carota HOM05D003337 ORTHO05D003808 7.4e-08 60.5 57 50.9
Duzib187G1394 Durio zibethinus HOM05D003337 ORTHO05D003808 7.4e-08 60.5 57 52.6
Glyma.06G066900 Glycine max HOM05D003337 ORTHO05D003808 7.4e-08 60.5 57 49.1
Nitab4.5_0002042g0010 Nicotiana tabacum HOM05D003337 ORTHO05D003808 7.4e-08 60.5 56 50.0
Nitab4.5_0004664g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 7.4e-08 60.5 56 48.2
Peaxi162Scf00136g02012 Petunia axillaris HOM05D003337 ORTHO05D003808 7.4e-08 60.5 56 50.0
Rhsim02G0202500 Rhododendron simsii HOM05D003337 ORTHO05D003808 7.4e-08 60.5 57 50.9
Sed0015158 Sechium edule HOM05D003337 ORTHO05D003808 7.4e-08 60.5 57 50.9
TAR625G0257 Trochodendron aralioides HOM05D003337 ORTHO05D003808 7.4e-08 60.5 56 51.8
MELO3C003713.2 Cucumis melo HOM05D003337 ORTHO05D003808 9.7e-08 60.1 57 49.1
CsaV3_3G046270 Cucumis sativus L. HOM05D003337 ORTHO05D003808 9.7e-08 60.1 57 49.1
Dinv18205 Davidia involucrata HOM05D003337 ORTHO05D003808 9.7e-08 60.1 57 50.9
Lalb_Chr11g0063671 Lupinus albus HOM05D003337 ORTHO05D003808 9.7e-08 60.1 56 50.0
Nn2g12124 Nelumbo nucifera HOM05D003337 ORTHO05D003808 9.7e-08 60.1 56 51.8
QL02p021300 Quercus lobata HOM05D003337 ORTHO05D003808 9.7e-08 60.1 57 50.9
Dinv05003 Davidia involucrata HOM05D003337 ORTHO05D003808 1.3e-07 59.7 57 50.9
Dinv41471 Davidia involucrata HOM05D003337 ORTHO05D003808 1.3e-07 59.7 56 57.1
FAN24G1139 Fragaria x ananassa HOM05D003337 ORTHO05D003808 1.3e-07 59.7 57 50.9
Gohir.A05G055900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 1.3e-07 59.7 57 50.9
Gorai.009G059100 Gossypium raimondii HOM05D003337 ORTHO05D003808 1.3e-07 59.7 57 50.9
TWI34G0528 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 1.3e-07 59.7 57 49.1
FAN20G0291 Fragaria x ananassa HOM05D003337 ORTHO05D003808 1.7e-07 59.3 57 50.9
Potri.006G256400 Populus trichocarpa HOM05D003337 ORTHO05D003808 1.7e-07 59.3 57 50.9
CiPaw.08G010200 Carya illinoinensis HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 49.1
FvH4_2g28850 Fragaria vesca HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 50.9
FAN27G2849 Fragaria x ananassa HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 50.9
Gohir.A05G055800 Gossypium hirsutum HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 50.9
Gohir.D05G057900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 50.9
Gorai.009G059000 Gossypium raimondii HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 50.9
Lsat_1_v5_gn_5_30121 Lactuca sativa HOM05D003337 ORTHO05D003808 2.2e-07 58.9 54 51.9
Prupe.1G482800 Prunus persica HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 50.9
RcHm_v2.0_Chr6g0297611 Rosa chinensis HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 50.9
Sc09g0010250 Simmondsia chinensis HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 52.6
Thecc.09G022400 Theobroma cacao HOM05D003337 ORTHO05D003808 2.2e-07 58.9 57 50.9
HPP92_010004 Vanilla planifolia HOM05D003337 ORTHO05D003808 2.2e-07 58.9 56 48.2
Gohir.D05G058000 Gossypium hirsutum HOM05D003337 ORTHO05D003808 2.8e-07 58.5 57 49.1
Sabra18G0028200 Salix brachista HOM05D003337 ORTHO05D003808 2.8e-07 58.5 57 49.1
CAN.G130.8 Capsicum annuum HOM05D003337 ORTHO05D003808 4.8e-07 57.8 56 50.0
Hma1.2p1_0243F.1_g101010 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 4.8e-07 57.8 56 50.0
Hma1.2p1_2800F.1_g328770 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 4.8e-07 57.8 56 50.0
TAR383G0794 Trochodendron aralioides HOM05D003337 ORTHO05D003808 4.8e-07 57.8 56 48.2
ECA246G2127 Erigeron canadensis HOM05D003337 ORTHO05D003808 6.3e-07 57.4 54 46.3
MD15G1127100 Malus domestica HOM05D003337 ORTHO05D003808 6.3e-07 57.4 57 49.1
ATR0739G172 Amborella trichopoda HOM05D003337 ORTHO05D003808 8.2e-07 57.0 56 50.0
FAN15G2120 Fragaria x ananassa HOM05D003337 ORTHO05D003808 8.2e-07 57.0 57 49.1
Sp4g04460 Schrenkiella parvula HOM05D003337 ORTHO05D003808 8.2e-07 57.0 57 43.9
Sopen06g008090 Solanum pennellii HOM05D003337 ORTHO05D003808 8.2e-07 57.0 56 50.0
TWI32G1054 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 8.2e-07 57.0 57 47.4
Nitab4.5_0000165g0080 Nicotiana tabacum HOM05D003337 ORTHO05D003808 1.1e-06 56.6 56 50.0
Nitab4.5_0001294g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 1.1e-06 56.6 56 50.0
CSS0014408 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.4e-06 56.2 57 45.6
CSS0019364 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.4e-06 56.2 57 45.6
MD08G1156500 Malus domestica HOM05D003337 ORTHO05D003808 1.8e-06 55.8 57 49.1
Carub.0004s0499 Capsella rubella HOM05D003337 ORTHO05D003808 3.1e-06 55.1 55 47.3
Atru.chr7.2458 Acer truncatum HOM05D003337 ORTHO05D003808 4.1e-06 54.7 55 49.1
AL4G16700 Arabidopsis lyrata HOM05D003337 ORTHO05D003808 4.1e-06 54.7 55 45.5
PSO170G2416 Papaver somniferum HOM05D003337 ORTHO05D003808 5.3e-06 54.3 56 48.2
SEGI_23839 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 5.3e-06 54.3 56 44.6
SEGI_27956 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 5.3e-06 54.3 56 44.6
BcaB08g35177 Brassica carinata HOM05D003337 ORTHO05D003808 6.9e-06 53.9 57 42.1
A09p55690 Brassica napus HOM05D003337 ORTHO05D003808 9.1e-06 53.5 57 42.1
BraA09t40970Z Brassica rapa HOM05D003337 ORTHO05D003808 9.1e-06 53.5 57 42.1


User provided reference genes

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