Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 6.3e-45 183.7 92 100.0
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 1.2e-35 152.9 105 78.1
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 1.2e-35 152.9 105 78.1
CSS0022710 Camellia sinensis var. sinensis HOM05D001837 ORTHO05D024694 4.7e-32 141.0 95 81.1
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 1.5e-14 82.8 41 97.6
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 7.5e-14 80.5 41 92.7
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 3.7e-13 78.2 41 87.8
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 3.7e-13 78.2 71 56.3
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 4.9e-13 77.8 41 87.8
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 4.9e-13 77.8 41 87.8
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 6.3e-13 77.4 57 68.4
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 6.3e-13 77.4 57 68.4
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 8.3e-13 77.0 41 85.4
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 1.8e-12 75.9 41 87.8
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.8e-12 75.9 41 87.8
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.8e-12 75.9 41 87.8
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 1.8e-12 75.9 41 87.8
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 1.8e-12 75.9 41 85.4
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 1.8e-12 75.9 41 87.8
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 2.4e-12 75.5 54 72.2
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 2.4e-12 75.5 41 82.9
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 2.4e-12 75.5 45 73.3
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 3.1e-12 75.1 41 85.4
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 3.1e-12 75.1 41 85.4
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 3.1e-12 75.1 54 68.5
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 4.1e-12 74.7 41 87.8
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 4.1e-12 74.7 41 87.8
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 5.4e-12 74.3 41 87.8
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 5.4e-12 74.3 41 85.4
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 5.4e-12 74.3 44 77.3
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 5.4e-12 74.3 41 85.4
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 5.4e-12 74.3 59 61.0
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 7.0e-12 73.9 41 85.4
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 9.2e-12 73.6 76 51.3
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 9.2e-12 73.6 41 82.9
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 9.2e-12 73.6 41 82.9
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 9.2e-12 73.6 41 85.4
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 9.2e-12 73.6 41 82.9
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 1.2e-11 73.2 44 77.3
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 1.2e-11 73.2 44 77.3
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 1.2e-11 73.2 44 77.3
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 1.2e-11 73.2 44 77.3
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.2e-11 73.2 44 77.3
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.2e-11 73.2 41 85.4
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 1.2e-11 73.2 44 77.3
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 1.2e-11 73.2 48 75.0
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 1.6e-11 72.8 54 64.8
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 1.6e-11 72.8 41 85.4
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 1.6e-11 72.8 44 79.5
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 2.7e-11 72.0 44 75.0
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 2.7e-11 72.0 44 75.0
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 2.7e-11 72.0 44 75.0
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 2.7e-11 72.0 41 82.9
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 2.7e-11 72.0 41 78.0
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 2.7e-11 72.0 44 75.0
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 3.5e-11 71.6 41 80.5
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 3.5e-11 71.6 41 82.9
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 3.5e-11 71.6 41 82.9
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 4.5e-11 71.2 41 82.9
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 4.5e-11 71.2 41 82.9
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 4.5e-11 71.2 41 82.9
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 4.5e-11 71.2 41 80.5
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 4.5e-11 71.2 40 85.0
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 4.5e-11 71.2 41 80.5
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 5.9e-11 70.9 41 80.5
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 5.9e-11 70.9 41 80.5
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 5.9e-11 70.9 58 63.8
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 5.9e-11 70.9 40 85.0
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 7.8e-11 70.5 44 70.5
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 7.8e-11 70.5 41 82.9
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 7.8e-11 70.5 44 72.7
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 7.8e-11 70.5 54 63.0
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 7.8e-11 70.5 41 78.0
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 7.8e-11 70.5 44 72.7
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 7.8e-11 70.5 41 80.5
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 1.3e-10 69.7 41 80.5
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 1.7e-10 69.3 41 75.6
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.7e-10 69.3 41 80.5
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 1.7e-10 69.3 41 78.0
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 1.7e-10 69.3 41 78.0
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 2.3e-10 68.9 41 80.5
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 2.9e-10 68.6 40 80.0
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 2.9e-10 68.6 41 78.0
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 3.8e-10 68.2 40 80.0
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 6.6e-10 67.4 41 75.6
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 1.1e-09 66.6 41 78.0
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.1e-09 66.6 41 78.0
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 1.1e-09 66.6 41 78.0
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 1.9e-09 65.9 41 75.6
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.2e-08 63.2 58 55.2
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 3.6e-08 61.6 44 61.4
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.6e-08 61.6 41 65.9
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.6e-08 61.6 41 65.9
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 4.7e-08 61.2 41 68.3
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 8.0e-08 60.5 50 72.0
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 8.0e-08 60.5 50 58.0
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 1.4e-07 59.7 54 53.7
MBI05_g10771_MAGBIO Magnolia biondii HOM05D001837 ORTHO05D003156 3.0e-07 58.5 35 82.9
CiPaw.06G086700 Carya illinoinensis HOM05D001837 ORTHO05D003156 4.0e-07 58.2 37 78.4
SEGI_40155 Sequoiadendron giganteum HOM05D001837 ORTHO05D003156 8.9e-07 57.0 54 53.7
Ciclev10020575m.g Citrus clementina HOM05D001837 ORTHO05D003156 1.2e-06 56.6 30 90.0
Nn3g17279 Nelumbo nucifera HOM05D001837 ORTHO05D003156 1.2e-06 56.6 30 90.0
HPP92_011255 Vanilla planifolia HOM05D001837 ORTHO05D003156 1.2e-06 56.6 49 61.2
CSS0026210 Camellia sinensis var. sinensis HOM05D001837 ORTHO05D003156 2.0e-06 55.8 27 96.3
Os11g0658700 Oryza sativa ssp. japonica HOM05D001837 ORTHO05D003156 2.0e-06 55.8 27 96.3
GSVIVG01007989001 Vitis vinifera HOM05D001837 ORTHO05D003156 2.0e-06 55.8 30 86.7
Zm00001eb165510 Zea mays HOM05D001837 ORTHO05D003156 2.0e-06 55.8 27 96.3
Aqoxy3G03432 Aquilegia oxysepala HOM05D001837 ORTHO05D003156 2.6e-06 55.5 30 86.7
Cfa018926 Carpinus fangiana HOM05D001837 ORTHO05D003156 2.6e-06 55.5 30 86.7
Hma1.2p1_1619F.1_g293930 Hydrangea macrophylla HOM05D001837 ORTHO05D003156 2.6e-06 55.5 27 92.6
PGR083G0186 Punica granatum HOM05D001837 ORTHO05D003156 2.6e-06 55.5 27 92.6
Dinv16662 Davidia involucrata HOM05D001837 ORTHO05D003156 3.4e-06 55.1 27 92.6
Gohir.A12G178400 Gossypium hirsutum HOM05D001837 ORTHO05D003156 3.4e-06 55.1 34 76.5
Gohir.D12G180800 Gossypium hirsutum HOM05D001837 ORTHO05D003156 3.4e-06 55.1 34 76.5
Gorai.008G194100 Gossypium raimondii HOM05D001837 ORTHO05D003156 3.4e-06 55.1 34 76.5
Nn4g23208 Nelumbo nucifera HOM05D001837 ORTHO05D003156 3.4e-06 55.1 30 86.7
Nn4g23210 Nelumbo nucifera HOM05D001837 ORTHO05D003156 3.4e-06 55.1 30 86.7
PSO013G0078 Papaver somniferum HOM05D001837 ORTHO05D003156 3.4e-06 55.1 30 86.7
PSO832G0505 Papaver somniferum HOM05D001837 ORTHO05D003156 3.4e-06 55.1 30 86.7
Thecc.03G090700 Theobroma cacao HOM05D001837 ORTHO05D003156 3.4e-06 55.1 27 92.6
TAR622G0453 Trochodendron aralioides HOM05D001837 ORTHO05D003156 3.4e-06 55.1 53 54.7
Actinidia37619 Actinidia chinensis HOM05D001837 ORTHO05D003156 4.4e-06 54.7 30 86.7
A08p30230 Brassica napus HOM05D001837 ORTHO05D003156 4.4e-06 54.7 35 77.1
CiPaw.05G133000 Carya illinoinensis HOM05D001837 ORTHO05D003156 4.4e-06 54.7 30 83.3
Actinidia04882 Actinidia chinensis HOM05D001837 ORTHO05D003156 5.7e-06 54.3 30 86.7
AL1G31230 Arabidopsis lyrata HOM05D001837 ORTHO05D003156 5.7e-06 54.3 35 77.1
arahy.Tifrunner.gnm1.ann1.GD5YP7 Arachis hypogaea HOM05D001837 ORTHO05D003156 5.7e-06 54.3 27 92.6
arahy.Tifrunner.gnm1.ann1.PIZ1S4 Arachis hypogaea HOM05D001837 ORTHO05D003156 5.7e-06 54.3 27 92.6
Carub.0001s1840 Capsella rubella HOM05D001837 ORTHO05D003156 5.7e-06 54.3 35 77.1
CARHR019390 Cardamine hirsuta HOM05D001837 ORTHO05D003156 5.7e-06 54.3 35 77.1
Haze_11995 Corylus avellana HOM05D001837 ORTHO05D003156 5.7e-06 54.3 27 92.6
Eucgr.B00522 Eucalyptus grandis HOM05D001837 ORTHO05D003156 5.7e-06 54.3 27 92.6
MD13G1070300 Malus domestica HOM05D001837 ORTHO05D003156 5.7e-06 54.3 27 92.6
MD16G1070700 Malus domestica HOM05D001837 ORTHO05D003156 5.7e-06 54.3 27 92.6
Prupe.1G276600 Prunus persica HOM05D001837 ORTHO05D003156 5.7e-06 54.3 27 92.6
RcHm_v2.0_Chr4g0439551 Rosa chinensis HOM05D001837 ORTHO05D003156 5.7e-06 54.3 27 92.6
AT1G18750 Arabidopsis thaliana HOM05D001837 ORTHO05D003156 7.5e-06 53.9 27 92.6
Ciclev10031963m.g Citrus clementina HOM05D001837 ORTHO05D003156 7.5e-06 53.9 27 88.9
Lsat_1_v5_gn_9_27060 Lactuca sativa HOM05D001837 ORTHO05D003156 7.5e-06 53.9 27 92.6
Lalb_Chr10g0098411 Lupinus albus HOM05D001837 ORTHO05D003156 7.5e-06 53.9 27 88.9
Lalb_Chr17g0340811 Lupinus albus HOM05D001837 ORTHO05D003156 7.5e-06 53.9 27 88.9
Medtr5g041650 Medicago truncatula HOM05D001837 ORTHO05D003156 7.5e-06 53.9 27 92.6
arahy.Tifrunner.gnm1.ann1.K1S2P8 Arachis hypogaea HOM05D001837 ORTHO05D003156 9.8e-06 53.5 27 92.6
arahy.Tifrunner.gnm1.ann1.U9RCFT Arachis hypogaea HOM05D001837 ORTHO05D003156 9.8e-06 53.5 27 92.6
CSS0046922 Camellia sinensis var. sinensis HOM05D001837 ORTHO05D003156 9.8e-06 53.5 30 83.3
Cpa.g.sc1.45 Carica papaya HOM05D001837 ORTHO05D003156 9.8e-06 53.5 27 88.9
Duzib068G1234 Durio zibethinus HOM05D001837 ORTHO05D003156 9.8e-06 53.5 26 96.2
Lj4g0016263 Lotus japonicus HOM05D001837 ORTHO05D003156 9.8e-06 53.5 27 88.9
Manes.14G079700 Manihot esculenta HOM05D001837 ORTHO05D003156 9.8e-06 53.5 30 83.3
Hund02639 Selenicereus undatus HOM05D001837 ORTHO05D003156 9.8e-06 53.5 27 88.9
TPR.G39192 Trifolium pratense HOM05D001837 ORTHO05D024694 9.8e-06 53.5 33 84.8


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