Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 2.6e-166 588.6 285 100.0
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 8.0e-139 497.3 286 83.2
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 6.7e-130 467.6 310 72.9
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 5.9e-126 454.5 280 76.4
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.8e-122 443.0 344 63.7
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 6.3e-120 434.5 268 74.3
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.3e-117 426.8 281 69.4
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 7.5e-113 411.0 283 65.4
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 9.8e-113 410.6 281 67.6
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.7e-112 409.8 281 68.7
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 8.3e-112 407.5 285 68.1
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.4e-111 406.8 285 67.0
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 4.1e-111 405.2 286 68.9
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 7.8e-110 401.0 273 68.5
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.7e-109 399.8 276 65.6
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 3.8e-109 398.7 281 65.1
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 5.0e-109 398.3 274 67.9
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 5.0e-109 398.3 276 66.7
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 6.6e-109 397.9 319 60.5
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 6.6e-109 397.9 278 66.2
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.5e-108 396.7 319 60.5
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 4.3e-108 395.2 278 66.9
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 7.3e-108 394.4 274 66.8
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.6e-107 393.3 255 69.8
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.1e-107 392.9 269 67.3
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 4.7e-107 391.7 281 63.3
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 6.1e-107 391.3 271 66.8
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 6.1e-107 391.3 286 64.0
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.8e-106 389.8 278 64.4
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.3e-106 389.4 286 66.8
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 4.0e-106 388.7 253 70.4
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.2e-105 387.1 268 62.7
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.2e-105 387.1 276 63.8
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 2.0e-105 386.3 275 64.7
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 2.6e-105 386.0 257 68.9
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.8e-105 384.8 286 65.7
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 2.9e-104 382.5 285 63.5
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 3.7e-104 382.1 285 62.8
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 4.9e-104 381.7 268 64.9
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 8.3e-104 380.9 252 67.5
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 1.1e-103 380.6 278 64.7
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 1.4e-103 380.2 227 78.4
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 3.2e-103 379.0 284 62.7
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 4.1e-103 378.6 268 64.2
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 7.0e-103 377.9 279 62.0
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 7.0e-103 377.9 277 63.5
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 7.0e-103 377.9 268 63.8
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 6.0e-102 374.8 273 63.4
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 1.0e-101 374.0 274 62.8
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 3.0e-101 372.5 277 63.5
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 1.5e-100 370.2 343 55.4
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.5e-100 369.4 307 58.3
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.6e-99 366.7 273 63.0
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 6.2e-99 364.8 258 64.0
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 2.3e-98 362.8 281 60.5
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.2e-97 360.5 277 62.1
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 1.5e-97 360.1 275 60.7
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.7e-96 355.5 279 63.1
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 1.1e-95 354.0 287 58.9
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 9.2e-95 350.9 268 60.8
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.2e-94 350.5 286 61.9
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 6.0e-94 348.2 257 63.8
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 2.3e-93 346.3 274 58.0
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 5.0e-93 345.1 308 54.9
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 2.5e-92 342.8 312 52.6
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 1.2e-91 340.5 380 46.8
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 3.6e-91 339.0 251 62.2
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 4.0e-90 335.5 277 57.0
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 6.8e-90 334.7 277 57.4
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 8.9e-90 334.3 273 58.2
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 2.0e-89 333.2 275 57.1
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 4.4e-89 332.0 274 56.2
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 8.3e-88 327.8 275 55.3
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 3.5e-86 322.4 244 58.6
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 1.3e-85 320.5 273 54.9
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.3e-85 320.5 274 58.4
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 3.3e-84 315.8 274 54.7
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 4.7e-83 312.0 207 70.0
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 8.1e-83 311.2 274 54.4
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.8e-82 310.1 207 68.6
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.5e-81 307.0 274 53.3
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 4.4e-81 305.4 235 58.3
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 5.8e-81 305.1 256 55.5
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 1.7e-80 303.5 202 69.3
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 9.2e-79 297.7 284 53.2
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 2.1e-78 296.6 206 65.5
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 3.5e-78 295.8 265 54.7
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 4.6e-78 295.4 202 67.3
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.7e-77 293.5 331 47.7
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 2.3e-77 293.1 255 54.1
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 3.0e-77 292.7 202 67.3
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.5e-76 290.4 188 74.5
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 5.6e-76 288.5 230 60.9
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.8e-74 283.5 271 50.6
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.8e-74 283.5 200 61.5
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 9.0e-74 281.2 200 60.5
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 1.2e-73 280.8 193 66.8
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 1.2e-73 280.8 208 60.1
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 4.4e-73 278.9 219 58.9
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 6.0e-70 268.5 210 58.6
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 3.8e-64 249.2 348 39.7
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 1.0e-61 241.1 138 79.7
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 6.7e-61 238.4 180 59.4
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 9.9e-57 224.6 186 55.4
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 7.1e-55 218.4 225 48.9
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.6e-54 217.2 211 50.7
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.0e-53 214.5 255 42.0
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 9.6e-52 208.0 256 39.8
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.3e-51 207.6 238 42.4
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 1.3e-45 187.6 184 51.1
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 7.4e-36 155.2 179 41.3
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 2.9e-32 143.3 184 38.0
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 5.0e-32 142.5 189 46.6
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 5.5e-31 139.0 170 44.7
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 3.9e-29 132.9 129 51.9
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 3.2e-23 113.2 246 31.7
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 3.9e-21 106.3 92 55.4
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 2.2e-16 90.5 71 52.1
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 5.2e-13 79.3 49 65.3
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 1.9e-07 60.8 73 41.1
Rhsim08G0184200 Rhododendron simsii HOM05D006653 ORTHO05D339565 3.6e-06 56.6 69 43.5
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 8.0e-06 55.5 73 39.7


User provided reference genes

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