Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019011 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.9e-85 319.3 178 100.0
CSS0022243 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.1e-76 289.3 183 91.3
CSS0049827 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.5e-76 288.5 183 91.3
CSS0009085 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.7e-75 286.2 183 90.2
CSS0004114 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.3e-75 285.8 183 90.2
CSS0017523 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 6.6e-75 284.3 183 89.6
CSS0042721 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.1e-74 283.5 181 90.1
CSS0001859 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.1e-67 258.1 197 80.7
CSS0027604 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.1e-67 258.1 197 80.7
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.5e-66 255.8 201 78.6
CSS0022133 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.9e-62 242.3 201 74.1
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 8.4e-38 161.0 207 55.6
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.9e-34 149.8 194 52.6
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 4.3e-34 148.7 194 53.6
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 3.8e-30 135.6 202 49.5
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 2.5e-29 132.9 202 48.0
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.0e-27 127.5 205 47.3
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 4.3e-26 122.1 212 44.3
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 4.3e-26 122.1 212 44.3
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 1.7e-25 120.2 198 44.4
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 3.7e-25 119.0 205 46.3
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 3.4e-23 112.5 164 54.3
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 8.5e-22 107.8 161 48.4
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 2.5e-21 106.3 166 47.0
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 7.2e-21 104.8 168 47.0
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 4.7e-20 102.1 202 42.1
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 4.7e-20 102.1 202 42.1
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 1.8e-19 100.1 145 49.0
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 2.3e-19 99.8 208 44.2
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 4.4e-18 95.5 206 39.8
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 9.7e-18 94.4 198 40.9
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 9.7e-18 94.4 208 37.5
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 9.7e-18 94.4 191 41.4
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 2.8e-17 92.8 202 39.6
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 2.4e-16 89.7 210 40.0
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 4.1e-16 89.0 195 40.0
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 5.3e-16 88.6 203 36.5
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 5.3e-16 88.6 204 38.2
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 9.1e-16 87.8 204 36.3
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 1.5e-15 87.0 156 43.6
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 1.5e-15 87.0 167 42.5
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 2.6e-15 86.3 139 47.5
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 3.4e-15 85.9 198 37.9
Ciclev10017876m.g Citrus clementina HOM05D004683 ORTHO05D005388 4.5e-15 85.5 161 39.8
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 5.9e-15 85.1 204 35.3
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 7.7e-15 84.7 198 37.4
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 1.0e-14 84.3 154 42.9
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 3.8e-14 82.4 198 37.4
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 8.5e-14 81.3 208 38.0
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 1.9e-13 80.1 199 35.7
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 3.2e-13 79.3 195 37.9
Haze_06980 Corylus avellana HOM05D004683 ORTHO05D005388 4.2e-13 79.0 167 40.1
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 4.2e-13 79.0 208 37.5
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 4.2e-13 79.0 161 42.2
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 5.5e-13 78.6 210 35.7
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 2.1e-12 76.6 192 38.0
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 2.1e-12 76.6 161 39.1
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 2.1e-12 76.6 150 40.7
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 2.1e-12 76.6 165 40.6
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 2.7e-12 76.3 210 39.5
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 3.6e-12 75.9 129 45.7
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 6.1e-12 75.1 196 37.8
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 1.8e-11 73.6 164 40.2
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 2.3e-11 73.2 211 36.0
VMungo0540G0168 Vigna mungo HOM05D004683 ORTHO05D005388 2.3e-11 73.2 132 43.2
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 3.0e-11 72.8 164 39.6
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 3.9e-11 72.4 162 38.3
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 3.9e-11 72.4 109 43.1
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 5.2e-11 72.0 188 34.6
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 6.7e-11 71.6 166 38.0
Ah.09g234040 Amaranthus hybridus HOM05D004683 ORTHO05D005388 1.5e-10 70.5 152 41.4
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 2.6e-10 69.7 196 35.7
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 3.3e-10 69.3 209 38.3
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 3.3e-10 69.3 165 40.6
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 4.4e-10 68.9 153 39.9
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 5.7e-10 68.6 183 32.8
Sopen00g010710 Solanum pennellii HOM05D004683 ORTHO05D005388 5.7e-10 68.6 179 33.5
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 9.7e-10 67.8 182 32.4
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 1.7e-09 67.0 166 40.4
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 4.8e-09 65.5 194 36.1
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 6.3e-09 65.1 214 36.4
Glyma.09G012400 Glycine max HOM05D004683 ORTHO05D005388 6.3e-09 65.1 134 41.0
Glyma.15G117000 Glycine max HOM05D004683 ORTHO05D005388 6.3e-09 65.1 129 40.3
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 6.3e-09 65.1 209 35.9
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 6.3e-09 65.1 151 33.8
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 8.2e-09 64.7 193 36.3
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 8.2e-09 64.7 165 37.0
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 1.1e-08 64.3 165 37.0
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 2.4e-08 63.2 161 37.3
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 3.1e-08 62.8 108 42.6
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 3.1e-08 62.8 164 39.0
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 4.1e-08 62.4 198 31.8
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 5.3e-08 62.0 198 32.3
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 1.2e-07 60.8 136 38.2
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 1.2e-07 60.8 202 34.7
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 3.5e-07 59.3 164 33.5
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 5.9e-07 58.5 209 32.1
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 1.3e-06 57.4 181 33.1
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 2.2e-06 56.6 136 36.8
unitig_37.g12182 Utricularia gibba HOM05D004683 ORTHO05D005388 2.9e-06 56.2 69 47.8
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 3.8e-06 55.8 139 36.7
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 5.0e-06 55.5 192 33.3
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 6.5e-06 55.1 217 30.4
QL07p047840 Quercus lobata HOM05D004683 ORTHO05D005388 8.5e-06 54.7 50 56.0


User provided reference genes

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