Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018984 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 3.5e-126 454.9 220 100.0
CSS0017361 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 9.3e-79 297.4 148 98.6
Actinidia29398 Actinidia chinensis HOM05D007440 ORTHO05D009418 1.5e-60 236.9 145 80.7
Hma1.2p1_0708F.1_g207100 Hydrangea macrophylla HOM05D007440 ORTHO05D009418 1.7e-59 233.4 144 75.0
Haze_13927 Corylus avellana HOM05D007440 ORTHO05D009418 3.1e-58 229.2 145 74.5
Cfa008111 Carpinus fangiana HOM05D007440 ORTHO05D009418 4.1e-58 228.8 144 75.0
Manes.18G121350 Manihot esculenta HOM05D007440 ORTHO05D009418 1.2e-57 227.3 145 74.5
Dinv41796 Davidia involucrata HOM05D007440 ORTHO05D009418 2.0e-57 226.5 152 73.7
PGSC0003DMG402002240 Solanum tuberosum HOM05D007440 ORTHO05D009418 2.0e-57 226.5 173 64.2
Solyc12g017690.3 Solanum lycopersicum HOM05D007440 ORTHO05D009418 3.4e-57 225.7 173 63.0
TAR381G0685 Trochodendron aralioides HOM05D007440 ORTHO05D009418 4.5e-57 225.3 145 74.5
Nitab4.5_0000219g0060 Nicotiana tabacum HOM05D007440 ORTHO05D009418 7.7e-57 224.6 173 63.6
Sopen12g008470 Solanum pennellii HOM05D007440 ORTHO05D009418 7.7e-57 224.6 173 62.4
CiPaw.03G017000 Carya illinoinensis HOM05D007440 ORTHO05D009418 1.0e-56 224.2 144 73.6
QL09p004054 Quercus lobata HOM05D007440 ORTHO05D009418 1.3e-56 223.8 145 71.7
GSVIVG01036437001 Vitis vinifera HOM05D007440 ORTHO05D009418 1.7e-56 223.4 145 71.0
FAN18G0056 Fragaria x ananassa HOM05D007440 ORTHO05D009418 2.9e-56 222.6 144 70.8
vmacro11038 Vaccinium macrocarpon HOM05D007440 ORTHO05D009418 5.0e-56 221.9 150 74.7
FAN04G2515 Fragaria x ananassa HOM05D007440 ORTHO05D009418 6.5e-56 221.5 140 72.1
PGR031G3126 Punica granatum HOM05D007440 ORTHO05D009418 8.5e-56 221.1 148 68.9
Nn1g02997 Nelumbo nucifera HOM05D007440 ORTHO05D009418 1.1e-55 220.7 145 71.7
Lsat_1_v5_gn_1_25281 Lactuca sativa HOM05D007440 ORTHO05D009418 1.9e-55 219.9 147 72.1
Oeu061891.1 Olea europaea HOM05D007440 ORTHO05D009418 1.9e-55 219.9 144 71.5
Ciclev10024582m.g Citrus clementina HOM05D007440 ORTHO05D009418 3.2e-55 219.2 142 72.5
Cc03_g16220 Coffea canephora HOM05D007440 ORTHO05D009418 3.2e-55 219.2 144 69.4
Potri.019G076200 Populus trichocarpa HOM05D007440 ORTHO05D009418 4.2e-55 218.8 137 75.9
Rhsim02G0174300 Rhododendron simsii HOM05D007440 ORTHO05D009418 4.2e-55 218.8 148 73.0
Lj9C701T14 Lonicera japonica HOM05D007440 ORTHO05D009418 1.6e-54 216.9 130 79.2
HanXRQChr02g0037061 Helianthus annuus HOM05D007440 ORTHO05D009418 2.7e-54 216.1 144 72.9
Thecc.08G172800 Theobroma cacao HOM05D007440 ORTHO05D009418 3.6e-54 215.7 145 66.9
Sabra19G0086600 Salix brachista HOM05D007440 ORTHO05D009418 1.0e-53 214.2 148 70.3
RcHm_v2.0_Chr7g0224381 Rosa chinensis HOM05D007440 ORTHO05D009418 1.8e-53 213.4 140 70.7
RcHm_v2.0_Chr7g0230881 Rosa chinensis HOM05D007440 ORTHO05D009418 2.3e-53 213.0 140 69.3
TWI23G1187 Tripterygium wilfordii HOM05D007440 ORTHO05D009418 3.0e-53 212.6 144 72.2
MD15G1399400 Malus domestica HOM05D007440 ORTHO05D009418 6.7e-53 211.5 142 69.0
SalBow6G1672 Salvia bowleyana HOM05D007440 ORTHO05D009418 8.8e-53 211.1 145 69.7
Atru.chr12.1704 Acer truncatum HOM05D007440 ORTHO05D009418 1.5e-52 210.3 137 74.5
Aqoxy6G00075 Aquilegia oxysepala HOM05D007440 ORTHO05D009418 2.0e-52 209.9 156 65.4
Eucgr.H00023 Eucalyptus grandis HOM05D007440 ORTHO05D009418 2.0e-52 209.9 145 66.9
Hund26630 Selenicereus undatus HOM05D007440 ORTHO05D009418 3.3e-52 209.1 144 69.4
Os10g0141900 Oryza sativa ssp. japonica HOM05D007440 ORTHO05D009418 4.4e-52 208.8 178 58.4
Cpa.g.sc21.56 Carica papaya HOM05D007440 ORTHO05D009418 5.7e-52 208.4 145 66.2
PSO170G3813 Papaver somniferum HOM05D007440 ORTHO05D009418 5.7e-52 208.4 146 67.1
MELO3C008079.2 Cucumis melo HOM05D007440 ORTHO05D009418 9.7e-52 207.6 178 61.2
ATR1089G110 Amborella trichopoda HOM05D007440 ORTHO05D009418 2.2e-51 206.5 142 68.3
ECA247G2087 Erigeron canadensis HOM05D007440 ORTHO05D009418 2.2e-51 206.5 143 71.3
Gohir.D05G254100 Gossypium hirsutum HOM05D007440 ORTHO05D009418 2.8e-51 206.1 137 67.9
Gorai.009G265700 Gossypium raimondii HOM05D007440 ORTHO05D009418 2.8e-51 206.1 137 67.9
CANSAT25G0816 Cannabis sativa HOM05D007440 ORTHO05D009418 4.8e-51 205.3 136 69.1
CsaV3_2G033090 Cucumis sativus L. HOM05D007440 ORTHO05D009418 4.8e-51 205.3 174 60.9
Gohir.A05G252301 Gossypium hirsutum HOM05D007440 ORTHO05D009418 1.1e-50 204.1 137 67.2
FAN08G1847 Fragaria x ananassa HOM05D007440 ORTHO05D009418 1.8e-50 203.4 144 66.7
Lalb_Chr17g0336871 Lupinus albus HOM05D007440 ORTHO05D009418 3.1e-50 202.6 137 69.3
Ca_12759_v3 Cicer arietinum L. HOM05D007440 ORTHO05D009418 5.3e-50 201.8 164 60.4
ClCG11G008830 Citrullus lanatus HOM05D007440 ORTHO05D009418 9.1e-50 201.1 140 67.1
Lj3g0019924 Lotus japonicus HOM05D007440 ORTHO05D009418 9.1e-50 201.1 137 69.3
arahy.Tifrunner.gnm1.ann1.E07HZ8 Arachis hypogaea HOM05D007440 ORTHO05D009418 1.2e-49 200.7 148 64.2
Psat7g227720 Pisum sativum HOM05D007440 ORTHO05D009418 1.2e-49 200.7 137 68.6
arahy.Tifrunner.gnm1.ann1.YQ4984 Arachis hypogaea HOM05D007440 ORTHO05D009418 1.6e-49 200.3 148 64.2
Migut.N03008 Erythranthe guttata HOM05D007440 ORTHO05D009418 2.6e-49 199.5 144 63.9
Sed0012539 Sechium edule HOM05D007440 ORTHO05D009418 3.5e-49 199.1 140 67.1
SGA_v2.0_scaffold19G08914 Striga asiatica HOM05D007440 ORTHO05D009418 4.5e-49 198.7 161 62.7
TPR.G34135 Trifolium pratense HOM05D007440 ORTHO05D009418 4.5e-49 198.7 137 67.9
Glyma.13G000800 Glycine max HOM05D007440 ORTHO05D009418 5.9e-49 198.4 140 69.3
CDE05G2917 Ceratophyllum demersum HOM05D007440 ORTHO05D009418 5.0e-48 195.3 138 66.7
HPP92_004660 Vanilla planifolia HOM05D007440 ORTHO05D009418 2.5e-47 193.0 148 66.2
Phvul.011G216600 Phaseolus vulgaris HOM05D007440 ORTHO05D009418 2.7e-46 189.5 140 66.4
Medtr4g031180 Medicago truncatula HOM05D007440 ORTHO05D009418 4.7e-46 188.7 137 66.4
Aa31LG4G9050 Aethionema arabicum HOM05D007440 ORTHO05D009418 6.7e-45 184.9 147 61.9
THA.LOC104810378 Tarenaya hassleriana HOM05D007440 ORTHO05D009418 1.5e-44 183.7 134 61.9
Lsat_1_v5_gn_7_9441 Lactuca sativa HOM05D007440 ORTHO05D009418 4.4e-44 182.2 130 67.7
FvH4_5g32910 Fragaria vesca HOM05D007440 ORTHO05D009418 4.2e-39 165.6 109 69.7
Mapoly0046s0064 Marchantia polymorpha HOM05D007440 ORTHO05D009418 1.4e-37 160.6 150 52.0
SMO347G0497 Selaginella moellendorffii HOM05D007440 ORTHO05D009418 1.8e-37 160.2 140 52.9
Prupe.1G546900 Prunus persica HOM05D007440 ORTHO05D009418 4.0e-37 159.1 103 71.8
Zm00001eb026400 Zea mays HOM05D007440 ORTHO05D009418 4.0e-37 159.1 137 56.9
AagrBONN_evm.TU.Sc2ySwM_362.1381 Anthoceros agrestis HOM05D007440 ORTHO05D009418 2.6e-36 156.4 151 49.0
Pp3c17_10270 Physcomitrium patens HOM05D007440 ORTHO05D009418 3.4e-36 156.0 143 54.5
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 1.3e-35 154.1 104 72.1
CAN.G8.41 Capsicum annuum HOM05D007440 ORTHO05D009418 7.7e-33 144.8 125 60.0
Cre10.g451000 Chlamydomonas reinhardtii HOM05D007440 ORTHO05D009418 1.2e-30 137.5 142 46.5
Pp3c9_24070 Physcomitrium patens HOM05D007440 ORTHO05D009418 8.8e-29 131.3 147 48.3
Nitab4.5_0006566g0010 Nicotiana tabacum HOM05D007440 ORTHO05D009418 1.2e-28 131.0 173 42.8
CBR_g29696 Chara braunii HOM05D007440 ORTHO05D009418 7.0e-26 121.7 218 33.0
Peaxi162Scf00017g00002 Petunia axillaris HOM05D007440 ORTHO05D009418 2.0e-25 120.2 145 44.1
Glyma.08G367700 Glycine max HOM05D007440 ORTHO05D009418 3.5e-25 119.4 72 73.6
PRCOL_00006364 Prasinoderma coloniale HOM05D007440 ORTHO05D009418 2.1e-22 110.2 149 34.9
SEGI_15929 Sequoiadendron giganteum HOM05D007440 ORTHO05D009418 1.4e-18 97.4 66 65.2
Atru.chr13.2418 Acer truncatum HOM05D007440 ORTHO05D009418 2.3e-16 90.1 125 43.2
MCO13G519 Micromonas commoda HOM05D007440 ORTHO05D009418 2.5e-15 86.7 80 47.5
MBI03_g14514_MAGBIO Magnolia biondii HOM05D007440 ORTHO05D009418 1.2e-14 84.3 63 65.1


User provided reference genes

Program Settings