Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.5e-48 195.3 109 100.0
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 3.3e-16 88.6 115 58.3
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 3.0e-14 82.0 102 55.9
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 5.8e-13 77.8 105 51.4
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 5.8e-13 77.8 105 51.4
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 1.1e-11 73.6 56 62.5
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 3.2e-11 72.0 85 52.9
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 4.1e-11 71.6 106 49.1
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 5.4e-11 71.2 90 47.8
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 7.0e-11 70.9 100 48.0
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.2e-10 70.1 53 66.0
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 1.2e-10 70.1 106 45.3
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 1.6e-10 69.7 103 47.6
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.6e-10 69.7 81 50.6
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.6e-10 69.7 61 57.4
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 2.7e-10 68.9 94 48.9
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 3.5e-10 68.6 101 45.5
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 1.0e-09 67.0 95 48.4
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.3e-09 66.6 102 44.1
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.7e-09 66.2 53 64.2
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 2.3e-09 65.9 101 44.6
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 3.9e-09 65.1 112 43.8
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 5.0e-09 64.7 69 55.1
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 5.0e-09 64.7 58 58.6
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 8.6e-09 63.9 96 45.8
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 8.6e-09 63.9 80 46.2
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 1.1e-08 63.5 101 49.5
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.5e-08 63.2 112 42.9
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 2.5e-08 62.4 91 46.2
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.5e-08 62.4 99 47.5
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 3.3e-08 62.0 106 45.3
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 5.6e-08 61.2 104 42.3
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 7.3e-08 60.8 110 40.9
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 7.3e-08 60.8 94 43.6
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 7.3e-08 60.8 94 45.7
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 9.5e-08 60.5 77 46.8
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 1.2e-07 60.1 110 41.8
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 1.6e-07 59.7 88 45.5
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 1.6e-07 59.7 118 40.7
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 1.6e-07 59.7 120 40.0
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 2.1e-07 59.3 115 40.0
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 2.8e-07 58.9 106 40.6
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 2.8e-07 58.9 104 43.3
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 2.8e-07 58.9 56 57.1
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.7e-07 58.2 103 43.7
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 4.7e-07 58.2 102 44.1
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 6.2e-07 57.8 105 43.8
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 6.2e-07 57.8 49 59.2
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 6.2e-07 57.8 53 60.4
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 8.0e-07 57.4 80 43.8
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 8.0e-07 57.4 73 45.2
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 1.1e-06 57.0 106 42.5
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 1.1e-06 57.0 95 42.1
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 1.4e-06 56.6 94 43.6
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 1.4e-06 56.6 111 41.4
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.4e-06 56.6 101 42.6
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 1.4e-06 56.6 82 45.1
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 1.8e-06 56.2 103 42.7
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.8e-06 56.2 103 42.7
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.8e-06 56.2 85 45.9
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 2.3e-06 55.8 112 42.9
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 3.1e-06 55.5 65 46.2
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.1e-06 55.5 111 41.4
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.0e-06 55.1 97 44.3
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 8.9e-06 53.9 111 37.8
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 8.9e-06 53.9 110 36.4


User provided reference genes

Program Settings