Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.2e-148 528.9 259 100.0
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.3e-119 433.3 268 83.2
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 3.9e-92 342.0 232 72.4
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 3.6e-90 335.5 249 69.5
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 1.7e-87 326.6 242 69.0
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 4.2e-86 322.0 250 68.4
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 3.5e-85 318.9 230 69.1
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 1.7e-84 316.6 237 66.2
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 6.6e-84 314.7 237 66.2
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 3.3e-83 312.4 230 67.8
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 1.1e-81 307.4 232 65.9
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 2.0e-80 303.1 230 64.8
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 2.0e-80 303.1 230 64.8
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 4.5e-80 302.0 250 62.4
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 2.2e-79 299.7 232 64.2
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 6.4e-79 298.1 231 62.8
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 8.4e-79 297.7 252 59.9
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 5.4e-78 295.0 251 59.8
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 7.9e-77 291.2 234 65.0
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 7.9e-77 291.2 230 63.5
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 1.0e-76 290.8 230 61.7
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 2.3e-76 289.7 228 62.7
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 3.0e-76 289.3 266 59.4
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 3.9e-76 288.9 234 63.2
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 5.1e-76 288.5 232 60.8
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 8.7e-76 287.7 237 61.2
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 1.9e-75 286.6 235 60.9
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 2.5e-75 286.2 230 60.9
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 9.6e-75 284.3 230 62.6
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 1.6e-74 283.5 230 60.9
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 8.1e-74 281.2 228 61.4
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 3.1e-73 279.3 232 60.3
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.2e-72 277.3 234 59.0
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 2.0e-72 276.6 199 66.8
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 3.4e-72 275.8 228 60.5
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 4.9e-71 271.9 228 60.5
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 6.4e-71 271.6 189 69.3
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 6.4e-71 271.6 232 58.2
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 4.2e-70 268.9 266 54.1
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 7.1e-70 268.1 253 56.5
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 7.9e-69 264.6 241 56.0
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.1e-67 260.8 200 64.5
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.1e-65 254.2 228 57.0
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.4e-65 253.8 261 53.3
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 2.4e-65 253.1 249 52.6
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 6.9e-65 251.5 242 55.8
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 2.6e-64 249.6 251 52.6
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 5.8e-64 248.4 206 62.1
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 4.9e-63 245.4 227 57.3
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 6.5e-63 245.0 245 54.7
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.1e-62 244.2 231 56.7
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 3.2e-62 242.7 179 67.0
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 5.5e-62 241.9 231 53.7
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 6.0e-61 238.4 301 44.2
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 1.0e-60 237.7 230 53.5
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.8e-60 236.9 200 64.0
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 3.9e-60 235.7 230 53.5
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 3.9e-60 235.7 230 53.0
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 5.1e-60 235.3 230 53.9
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 8.7e-60 234.6 228 54.4
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.5e-59 233.8 230 53.5
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 1.5e-59 233.8 230 53.0
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 3.3e-59 232.6 232 54.3
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 7.4e-59 231.5 230 51.7
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 7.4e-59 231.5 209 62.2
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 7.4e-59 231.5 256 51.2
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.3e-58 230.7 233 53.2
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 1.1e-57 227.6 197 59.4
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.2e-56 224.2 240 50.8
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 4.5e-56 222.2 230 50.0
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.0e-55 221.1 231 48.1
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 2.2e-55 219.9 237 49.8
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 3.8e-55 219.2 230 50.0
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 3.8e-55 219.2 230 50.0
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 3.8e-55 219.2 230 50.0
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 3.2e-54 216.1 183 58.5
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 4.2e-54 215.7 230 51.7
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 6.1e-53 211.8 230 49.1
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 2.3e-52 209.9 301 45.5
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 3.0e-52 209.5 241 47.7
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 5.1e-52 208.8 254 45.3
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 1.7e-50 203.8 255 45.9
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 9.1e-49 198.0 244 46.7
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.2e-48 197.6 252 48.0
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 3.8e-47 192.6 232 45.3
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 5.0e-47 192.2 252 46.8
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 6.5e-47 191.8 143 65.7
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 2.7e-45 186.4 223 48.0
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 1.1e-41 174.5 261 42.9
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.4e-41 174.1 237 40.9
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.4e-41 174.1 173 53.2
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 4.2e-38 162.5 146 58.9
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 1.4e-28 131.0 135 51.1
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 2.0e-24 117.1 152 46.1
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 3.8e-23 112.8 210 32.4
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.5e-22 110.9 192 39.6
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 1.9e-22 110.5 230 35.7
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 2.1e-21 107.1 241 33.2
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 5.2e-20 102.4 137 41.6
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 5.2e-20 102.4 266 30.1
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 1.7e-18 97.4 169 37.9
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.7e-16 90.1 85 50.6
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 1.5e-14 84.3 233 28.3
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 1.5e-11 74.3 108 39.8


User provided reference genes

Program Settings