Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 0.0e+00 1134.0 568 100.0
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 3.0e-238 828.6 651 68.7
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 2.6e-226 788.9 574 73.5
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 1.4e-206 723.4 577 66.9
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 2.6e-205 719.2 581 66.6
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 9.1e-203 710.7 579 67.0
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 3.2e-200 702.2 579 66.5
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 5.5e-200 701.4 547 69.5
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 6.1e-199 698.0 577 65.0
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 6.8e-198 694.5 606 64.2
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 6.8e-198 694.5 606 64.2
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 7.5e-197 691.0 653 60.3
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 1.7e-196 689.9 586 64.5
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 1.1e-195 687.2 569 65.6
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 3.1e-195 685.6 582 64.1
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 2.9e-193 679.1 574 63.8
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 2.8e-191 672.5 586 64.3
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 1.0e-190 670.6 569 65.6
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 8.9e-190 667.5 576 64.6
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 8.3e-188 661.0 522 69.5
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 3.1e-187 659.1 577 63.3
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 1.2e-186 657.1 542 66.1
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.0e-186 656.4 549 65.4
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 2.7e-186 656.0 530 66.6
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 2.7e-186 656.0 537 65.9
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 3.3e-184 649.0 581 63.9
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 2.1e-183 646.4 572 62.6
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.6e-181 639.4 550 63.6
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 3.4e-181 639.0 572 63.1
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 4.1e-179 632.1 576 62.2
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 9.2e-179 630.9 564 62.1
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.3e-177 627.1 571 61.6
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 8.6e-177 624.4 536 61.9
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 1.1e-176 624.0 574 61.3
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 9.5e-176 620.9 569 60.8
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.1e-175 619.8 576 61.3
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 2.8e-175 619.4 550 62.9
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.6e-175 619.0 574 60.8
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 3.6e-175 619.0 570 60.9
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 6.2e-175 618.2 575 61.0
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 6.2e-175 618.2 569 60.8
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.4e-174 617.1 509 65.0
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 3.1e-174 615.9 579 60.8
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 2.6e-173 612.8 508 64.8
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 3.4e-173 612.5 549 61.2
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 2.9e-172 609.4 582 60.5
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 5.4e-171 605.1 545 61.7
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.9e-169 599.0 573 60.6
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 1.2e-167 594.0 548 60.9
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 2.3e-166 589.7 578 58.7
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 1.2e-165 587.4 533 61.7
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 2.6e-165 586.3 581 58.3
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 2.2e-164 583.2 509 62.5
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 3.7e-164 582.4 509 61.5
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 8.3e-164 581.3 514 61.7
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 7.1e-163 578.2 579 57.7
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 9.2e-163 577.8 510 61.8
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 4.6e-162 575.5 563 58.4
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 2.3e-161 573.2 543 59.9
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 2.3e-161 573.2 514 60.3
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 8.9e-158 561.2 506 62.3
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 3.8e-156 555.8 501 59.7
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.4e-155 553.9 522 60.9
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 2.3e-153 546.6 512 60.4
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 3.3e-152 542.7 582 56.2
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.2e-149 534.3 574 55.7
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 7.6e-149 531.6 501 59.3
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.4e-147 527.3 506 59.1
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.2e-147 526.2 491 60.1
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.6e-146 523.9 340 77.9
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 6.6e-145 518.5 576 53.0
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 1.1e-144 517.7 505 55.4
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 6.2e-143 511.9 442 62.4
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 8.1e-143 511.5 420 65.5
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 3.1e-142 509.6 469 62.9
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 4.2e-139 499.2 505 57.0
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 2.3e-137 493.4 473 58.1
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 5.1e-137 492.3 573 52.7
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.7e-137 491.9 525 53.3
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.9e-136 490.3 511 55.6
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 1.3e-135 487.6 519 55.5
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.1e-134 484.6 575 51.0
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 1.1e-128 464.5 550 50.7
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 1.1e-128 464.5 545 51.6
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.9e-124 449.9 496 53.6
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 4.2e-123 446.0 336 71.7
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 2.3e-121 440.3 508 51.4
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 5.5e-115 419.1 537 48.4
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 2.1e-114 417.2 423 57.9
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.7e-111 407.5 533 49.7
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 8.5e-108 395.2 501 47.9
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 9.4e-107 391.7 513 48.3
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 2.0e-104 384.0 510 46.7
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 5.5e-99 365.9 303 64.0
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.0e-97 361.7 539 43.2
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 1.8e-97 360.9 551 42.6
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 4.1e-94 349.7 573 40.5
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 5.3e-94 349.4 245 77.6
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 3.6e-90 336.7 506 44.5
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.0e-89 335.1 603 40.0
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.9e-84 317.0 221 75.1
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.1e-83 315.1 564 39.5
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.2e-82 311.6 290 60.0
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 2.1e-82 310.8 565 39.6
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.0e-81 308.5 445 43.1
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 1.2e-80 305.1 548 39.4
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 2.0e-61 241.1 605 32.6
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 2.8e-58 230.7 383 43.3
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 1.9e-51 208.0 636 29.9
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 3.9e-44 183.7 135 68.1
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 4.3e-43 180.3 550 29.1
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 6.2e-42 176.4 388 35.1
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 4.4e-40 170.2 141 64.5
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 4.8e-34 150.2 86 81.4
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 2.9e-15 87.8 159 40.3
Hma1.2p1_0633F.1_g192500 Hydrangea macrophylla HOM05D052857 ORTHO05D008342 8.2e-10 69.7 72 51.4
Hma1.2p1_1375F.1_g279078 Hydrangea macrophylla HOM05D052857 ORTHO05D008342 8.2e-10 69.7 72 51.4
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.6e-08 64.7 138 31.9
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 1.7e-07 62.0 51 58.8
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 1.4e-06 58.9 66 50.0


User provided reference genes

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