Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018925 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 0.0e+00 1150.6 585 100.0
CSS0019235 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.3e-252 876.3 600 77.8
CSS0045163 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.8e-238 829.3 562 77.8
CSS0045513 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 8.0e-194 681.0 534 69.7
CSS0027057 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.3e-151 540.8 490 64.1
CSS0015130 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.5e-38 164.5 498 29.1
CSS0013817 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.1e-29 134.8 108 63.9
CSS0007065 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 8.1e-29 132.9 88 72.7
CSS0028660 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000589 1.8e-28 131.7 378 30.4
CSS0025772 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 6.4e-26 123.2 91 64.8
CSS0006552 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 5.4e-25 120.2 92 64.1
CSS0022071 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D012208 2.1e-24 118.2 143 43.4
CSS0003582 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.7e-24 117.9 95 61.1
CSS0000183 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000352 2.3e-23 114.8 369 30.6
CSS0017336 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000352 3.0e-23 114.4 161 41.0
CSS0020048 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000352 5.1e-23 113.6 369 30.4
CSS0011427 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000589 3.3e-22 110.9 160 40.0
CSS0018264 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 3.6e-21 107.5 92 57.6
CSS0039727 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 9.3e-17 92.8 61 67.2
CSS0010631 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 3.0e-15 87.8 91 50.5
CSS0040181 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 3.0e-15 87.8 61 60.7
CSS0023440 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 1.1e-14 85.9 61 63.9
CSS0017844 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 5.6e-14 83.6 61 60.7
CSS0036497 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 1.6e-13 82.0 55 69.1
Actinidia20119 Actinidia chinensis HOM05D010691 ORTHO05D008628 2.8e-13 81.3 86 50.0
CSS0005344 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 8.1e-13 79.7 61 55.7
CSS0021922 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 3.1e-12 77.8 189 31.7
CSS0039158 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 4.0e-12 77.4 61 59.0
vmacro07682 Vaccinium macrocarpon HOM05D000026 ORTHO05D000127 6.4e-10 70.1 94 45.7
CSS0046816 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 2.4e-09 68.2 54 57.4
CSS0030729 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 7.1e-09 66.6 55 54.5
CSS0039449 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 3.5e-08 64.3 55 54.5
Sopen11g013060 Solanum pennellii HOM05D000047 ORTHO05D000589 8.7e-07 59.7 302 23.8
CSS0044758 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 1.5e-06 58.9 41 65.9
CSS0028595 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 1.9e-06 58.5 41 65.9
CSS0049846 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 3.3e-06 57.8 41 63.4
Sopen01g018900 Solanum pennellii HOM05D000047 ORTHO05D000044 4.3e-06 57.4 306 24.8
CSS0036293 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 5.6e-06 57.0 41 63.4


User provided reference genes

Program Settings