Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 5.1e-72 274.2 132 100.0
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 6.7e-56 220.7 134 82.8
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 2.0e-52 209.1 132 77.3
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 9.9e-52 206.8 132 78.0
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 6.4e-51 204.1 132 73.5
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 8.4e-51 203.8 132 73.5
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 1.4e-50 203.0 132 75.0
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 3.2e-50 201.8 134 73.9
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 5.5e-50 201.1 134 73.1
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 1.6e-49 199.5 132 74.2
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 3.5e-49 198.4 133 72.9
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 4.6e-49 198.0 134 72.4
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 6.0e-49 197.6 132 74.2
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 7.9e-49 197.2 132 72.7
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 2.3e-48 195.7 134 70.1
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 2.3e-48 195.7 134 71.6
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 3.9e-48 194.9 134 70.9
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.9e-48 194.9 133 72.9
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 6.7e-48 194.1 134 70.1
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 6.7e-48 194.1 134 72.4
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 2.5e-47 192.2 134 71.6
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 2.5e-47 192.2 134 70.1
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 5.6e-47 191.0 131 71.8
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 7.4e-47 190.7 133 70.7
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 7.4e-47 190.7 133 71.4
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 7.4e-47 190.7 134 69.4
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 9.6e-47 190.3 134 71.6
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 1.6e-46 189.5 134 68.7
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 1.6e-46 189.5 134 69.4
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 1.6e-46 189.5 131 70.2
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 2.1e-46 189.1 134 70.1
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 2.8e-46 188.7 134 70.1
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 2.8e-46 188.7 134 70.1
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 4.8e-46 188.0 134 70.1
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 4.8e-46 188.0 131 69.5
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 4.8e-46 188.0 131 69.5
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 1.1e-45 186.8 134 69.4
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 1.4e-45 186.4 134 69.4
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.4e-45 186.4 136 71.3
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.8e-45 186.0 134 69.4
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 3.1e-45 185.3 134 68.7
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 3.1e-45 185.3 133 68.4
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 4.0e-45 184.9 132 67.4
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 4.0e-45 184.9 134 67.9
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 6.9e-45 184.1 133 69.9
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 9.0e-45 183.7 132 68.9
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 9.0e-45 183.7 132 68.9
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.2e-44 183.3 134 69.4
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 1.2e-44 183.3 136 70.6
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 4.5e-44 181.4 130 67.7
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.6e-44 180.6 136 69.1
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.6e-44 180.6 136 69.1
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.6e-44 180.6 136 69.1
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 1.0e-43 180.3 134 67.9
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.3e-43 179.9 132 66.7
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 1.7e-43 179.5 130 68.5
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 2.9e-43 178.7 135 68.1
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.8e-43 178.3 136 68.4
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 3.8e-43 178.3 135 69.6
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 4.9e-43 177.9 137 66.4
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 8.4e-43 177.2 132 65.9
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 1.1e-42 176.8 130 69.2
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 2.7e-41 172.2 132 65.9
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 4.6e-41 171.4 129 64.3
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 6.0e-41 171.0 130 63.8
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 6.0e-41 171.0 132 62.9
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 6.0e-41 171.0 134 64.9
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 7.9e-41 170.6 130 63.8
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 7.9e-41 170.6 130 63.8
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 7.9e-41 170.6 130 63.8
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 7.9e-41 170.6 130 63.8
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 7.9e-41 170.6 130 63.8
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 1.3e-40 169.9 80 96.2
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 1.3e-40 169.9 134 65.7
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 1.8e-40 169.5 130 63.1
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 1.8e-40 169.5 130 63.1
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 2.3e-40 169.1 130 63.1
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 2.3e-40 169.1 130 63.1
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 3.9e-40 168.3 130 62.3
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 5.1e-40 167.9 130 62.3
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 5.1e-40 167.9 130 62.3
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 5.1e-40 167.9 130 62.3
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 5.1e-40 167.9 80 91.2
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 1.5e-39 166.4 130 63.1
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 1.9e-39 166.0 129 62.8
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 3.3e-39 165.2 130 61.5
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 3.3e-39 165.2 81 88.9
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 1.1e-37 160.2 81 86.4
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 6.9e-37 157.5 76 93.4
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 2.0e-36 156.0 80 86.2
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 4.5e-36 154.8 76 90.8
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 4.5e-36 154.8 104 75.0
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 5.9e-36 154.5 81 85.2
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 1.0e-35 153.7 128 60.9
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 2.2e-35 152.5 88 75.0
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 2.9e-35 152.1 80 83.8
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 1.4e-34 149.8 80 83.8
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 2.5e-34 149.1 98 74.5
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 5.5e-34 147.9 77 87.0
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 1.2e-33 146.7 80 81.2
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 3.6e-33 145.2 101 70.3
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 4.6e-33 144.8 76 85.5
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 3.9e-32 141.7 76 82.9
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 3.7e-30 135.2 101 65.3
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 6.3e-30 134.4 128 53.9
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.4e-29 132.5 105 63.8
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 5.3e-29 131.3 100 64.0
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 5.3e-29 131.3 100 64.0
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 9.1e-29 130.6 100 66.0
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 2.6e-28 129.0 127 54.3
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 2.6e-28 129.0 127 54.3
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 3.4e-28 128.6 100 64.0
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.1e-26 123.6 67 77.6
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 6.1e-25 117.9 98 61.2
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 1.8e-24 116.3 109 57.8
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 4.1e-21 105.1 54 87.0
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 3.2e-18 95.5 132 47.0
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 8.8e-16 87.4 127 40.2
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 4.4e-15 85.1 79 53.2
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 6.3e-14 81.3 77 46.8
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 4.5e-12 75.1 69 49.3
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 2.2e-11 72.8 149 34.9
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 1.1e-10 70.5 33 97.0
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 6.1e-09 64.7 30 86.7
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 4.0e-08 62.0 31 90.3
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 3.7e-06 55.5 25 96.0


User provided reference genes

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