Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018885 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.9e-153 545.8 275 100.0
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 2.2e-122 442.6 222 99.5
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.8e-71 273.5 288 55.6
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 7.6e-70 268.1 285 55.1
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 9.9e-70 267.7 286 54.2
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 3.8e-69 265.8 287 55.4
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 2.8e-64 249.6 296 51.4
vmacro01023 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 7.3e-57 224.9 286 48.3
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 2.8e-56 223.0 288 48.6
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 9.0e-55 218.0 286 50.3
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 7.1e-52 208.4 287 46.7
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 1.6e-51 207.2 284 46.8
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 1.0e-50 204.5 291 47.1
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 4.3e-49 199.1 288 44.4
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.5e-46 190.7 284 42.3
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 5.8e-46 188.7 282 42.9
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 1.0e-42 177.9 287 43.6
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 6.7e-42 175.3 283 41.0
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 1.9e-41 173.7 282 41.5
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 4.3e-41 172.6 283 41.3
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 9.6e-41 171.4 395 33.9
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 9.6e-41 171.4 283 40.6
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 1.6e-40 170.6 286 43.0
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 2.8e-40 169.9 270 42.6
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 4.8e-40 169.1 286 43.4
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 8.2e-40 168.3 288 39.2
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 8.2e-40 168.3 280 38.6
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 1.2e-38 164.5 282 40.8
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 1.3e-37 161.0 272 38.6
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 1.7e-37 160.6 281 39.5
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 2.2e-37 160.2 285 42.1
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 2.2e-37 160.2 280 39.6
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 4.2e-36 156.0 287 39.7
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 1.6e-35 154.1 293 38.2
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 5.1e-34 149.1 287 39.0
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 5.1e-34 149.1 290 36.6
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 1.1e-33 147.9 271 39.9
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 1.5e-33 147.5 291 38.1
Lj6P837T11 Lonicera japonica HOM05D003379 ORTHO05D003862 1.9e-33 147.1 165 50.9
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 1.9e-33 147.1 290 37.2
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 5.7e-33 145.6 290 36.2
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 1.3e-32 144.4 270 40.4
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 1.6e-32 144.1 280 36.1
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 2.8e-32 143.3 279 38.4
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 6.3e-32 142.1 270 37.0
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 6.3e-32 142.1 279 36.6
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 1.1e-31 141.4 285 36.5
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.1e-31 141.4 286 37.8
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 1.4e-31 141.0 283 39.2
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 2.4e-31 140.2 282 36.5
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 3.1e-31 139.8 275 38.2
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 1.0e-29 134.8 272 36.0
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 2.9e-29 133.3 272 36.4
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 3.8e-29 132.9 264 39.4
Lalb_Chr22g0359971 Lupinus albus HOM05D003379 ORTHO05D003862 5.0e-29 132.5 281 35.9
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 5.0e-29 132.5 284 34.9
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 6.5e-29 132.1 276 36.6
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 6.5e-29 132.1 279 35.8
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 1.1e-28 131.3 276 35.5
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 2.5e-28 130.2 271 35.1
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 3.2e-28 129.8 280 37.1
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 4.2e-28 129.4 271 36.2
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 4.2e-28 129.4 288 37.8
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 4.2e-28 129.4 280 37.1
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 7.2e-28 128.6 272 37.1
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 9.4e-28 128.3 281 37.7
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 1.6e-27 127.5 273 35.9
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 1.6e-27 127.5 279 36.9
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.7e-27 126.7 280 36.1
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 3.6e-27 126.3 279 34.8
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 3.6e-27 126.3 276 34.8
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 6.1e-27 125.6 281 35.2
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 7.9e-27 125.2 279 35.8
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 1.4e-26 124.4 272 34.9
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 1.8e-26 124.0 275 37.1
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.8e-26 124.0 283 35.7
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 2.3e-26 123.6 265 37.4
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 8.8e-26 121.7 288 35.1
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 8.8e-26 121.7 265 34.0
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.1e-25 121.3 282 34.4
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 1.1e-25 121.3 256 37.1
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.0e-25 120.6 276 35.5
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 5.7e-25 119.0 284 33.1
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 5.7e-25 119.0 283 34.3
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 7.4e-25 118.6 264 34.5
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 1.7e-24 117.5 260 34.6
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 2.8e-24 116.7 285 32.6
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 2.8e-24 116.7 278 34.5
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 2.8e-24 116.7 293 34.5
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 3.7e-24 116.3 268 34.0
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 3.7e-24 116.3 219 39.3
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 4.8e-24 115.9 284 32.7
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 6.3e-24 115.5 200 40.0
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 6.3e-24 115.5 284 32.4
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 1.1e-23 114.8 287 31.7
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 1.4e-23 114.4 252 35.7
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.8e-23 114.0 282 34.4
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 1.8e-23 114.0 272 33.5
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 1.8e-23 114.0 298 32.2
AUR62012502 Chenopodium quinoa HOM05D003379 ORTHO05D003862 4.1e-23 112.8 274 34.7
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 4.1e-23 112.8 282 34.0
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 4.1e-23 112.8 282 34.0
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 1.2e-22 111.3 253 34.0
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 1.5e-22 110.9 280 33.9
SalBow6G5409 Salvia bowleyana HOM05D003379 ORTHO05D003862 3.4e-22 109.8 270 32.6
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 4.5e-22 109.4 267 33.3
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 4.5e-22 109.4 276 33.3
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 5.9e-22 109.0 267 36.7
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.0e-21 108.2 274 34.3
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 1.0e-21 108.2 265 37.4
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 1.7e-21 107.5 278 34.2
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 2.9e-21 106.7 261 33.0
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 2.9e-21 106.7 274 33.2
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 6.5e-21 105.5 267 33.0
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 1.4e-20 104.4 261 33.7
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 1.9e-20 104.0 213 35.7
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 1.9e-20 104.0 273 33.0
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 2.5e-20 103.6 276 29.7
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 7.2e-20 102.1 264 30.3
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 7.2e-20 102.1 277 34.3
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 7.2e-20 102.1 265 36.6
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 9.4e-20 101.7 269 34.6
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 9.4e-20 101.7 283 33.2
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 2.1e-19 100.5 282 30.5
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 2.7e-19 100.1 255 32.9
Cpa.g.sc38.89 Carica papaya HOM05D003379 ORTHO05D003862 2.7e-19 100.1 166 39.8
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 4.7e-19 99.4 265 33.6
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 4.7e-19 99.4 279 33.0
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 7.9e-19 98.6 264 32.6
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 3.0e-18 96.7 283 31.1
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 5.1e-18 95.9 275 31.6
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 5.1e-18 95.9 280 30.7
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 5.1e-18 95.9 269 31.2
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 1.5e-17 94.4 251 33.9
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 7.4e-17 92.0 200 37.5
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 9.7e-17 91.7 275 30.5
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 1.3e-16 91.3 274 30.3
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 2.2e-16 90.5 251 32.3
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 2.8e-16 90.1 234 35.0
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 3.7e-16 89.7 202 36.6
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 4.8e-16 89.4 192 35.9
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 6.3e-16 89.0 263 30.0
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 1.1e-15 88.2 199 35.7
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 1.1e-15 88.2 194 36.1
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 1.4e-15 87.8 202 35.6
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 3.1e-15 86.7 267 31.5
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 7.0e-15 85.5 309 29.1
Zm00001eb421370 Zea mays HOM05D003379 ORTHO05D003862 2.6e-14 83.6 254 30.7
ECA234G2936 Erigeron canadensis HOM05D003379 ORTHO05D003862 7.7e-14 82.0 283 33.6
Zm00001eb084870 Zea mays HOM05D003379 ORTHO05D003862 7.7e-14 82.0 255 30.6
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 2.2e-13 80.5 198 35.4
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 5.0e-13 79.3 211 33.2
ECA246G3772 Erigeron canadensis HOM05D003379 ORTHO05D003862 1.1e-12 78.2 265 28.7
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 1.9e-12 77.4 174 35.6
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 1.5e-09 67.8 280 27.9
HPP92_006450 Vanilla planifolia HOM05D003379 ORTHO05D003862 2.0e-09 67.4 209 31.1
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 2.6e-09 67.0 211 31.3
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 4.4e-09 66.2 142 32.4
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 5.7e-09 65.9 201 30.3
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 1.6e-06 57.8 275 25.1
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 1.6e-06 57.8 124 34.7
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 2.7e-06 57.0 137 35.8
BcaC01g02664 Brassica carinata HOM05D003379 ORTHO05D003862 4.5e-06 56.2 119 30.3
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 4.5e-06 56.2 135 30.4
BolC3t18480H Brassica oleracea HOM05D003379 ORTHO05D003862 7.7e-06 55.5 119 30.3


User provided reference genes

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