Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018883 Camellia sinensis var. sinensis HOM05D021695 ORTHO05D013658 3.5e-70 268.1 128 100.0
CSS0002595 Camellia sinensis var. sinensis HOM05D021695 ORTHO05D013658 5.1e-61 237.7 126 93.7
Actinidia23749 Actinidia chinensis HOM05D000576 ORTHO05D000368 1.1e-20 103.6 105 54.3
Actinidia24869 Actinidia chinensis HOM05D021695 ORTHO05D013658 3.2e-15 85.5 103 47.6
Hma1.2p1_0418F.1_g149130 Hydrangea macrophylla HOM05D021695 ORTHO05D013658 6.3e-11 71.2 88 46.6
Rhsim01G0265600 Rhododendron simsii HOM05D008923 ORTHO05D010536 2.4e-10 69.3 69 56.5
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 2.7e-09 65.9 90 40.0
FAN19G1792 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.0e-08 63.9 99 37.4
QL10p005864 Quercus lobata HOM05D000576 ORTHO05D000368 1.0e-08 63.9 87 43.7
Ciclev10008279m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.7e-08 63.2 81 42.0
vmacro18523 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 6.5e-08 61.2 83 39.8
QL03p059577 Quercus lobata HOM05D000576 ORTHO05D000368 1.5e-07 60.1 88 37.5
QL10p005844 Quercus lobata HOM05D021695 ORTHO05D013658 1.5e-07 60.1 84 42.9
MSTRG.8963 Avicennia marina HOM05D000576 ORTHO05D000368 3.2e-07 58.9 96 35.4
FvH4_1g04280 Fragaria vesca HOM05D000576 ORTHO05D000368 3.2e-07 58.9 92 33.7
Rhsim01G0067400 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.2e-07 58.9 85 37.6
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.2e-07 58.5 84 38.1
COL.COLO4_37414 Corchorus olitorius HOM05D021695 ORTHO05D013658 5.5e-07 58.2 85 38.8
Migut.J00215 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.5e-07 58.2 103 35.0
Rhsim08G0187200 Rhododendron simsii HOM05D000576 ORTHO05D000368 5.5e-07 58.2 83 38.6
COL.COLO4_29715 Corchorus olitorius HOM05D000576 ORTHO05D000368 7.2e-07 57.8 96 38.5
Migut.J00168 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.4e-07 57.4 87 36.8
ECA233G4739 Erigeron canadensis HOM05D000576 ORTHO05D000368 1.2e-06 57.0 92 34.8
FAN28G2519 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.2e-06 57.0 92 33.7
Rhsim08G0184100 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.2e-06 57.0 80 43.8
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 1.6e-06 56.6 94 30.9
Migut.J00163 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-06 56.6 79 38.0
Peaxi162Scf00304g00831 Petunia axillaris HOM05D000576 ORTHO05D000368 1.6e-06 56.6 91 28.6
Peaxi162Scf00340g00318 Petunia axillaris HOM05D000576 ORTHO05D000368 1.6e-06 56.6 79 36.7
COL.COLO4_25983 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.1e-06 56.2 101 34.7
COL.COLO4_25985 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.1e-06 56.2 94 33.0
Dinv38540 Davidia involucrata HOM05D000576 ORTHO05D013658 2.1e-06 56.2 99 32.3
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 2.1e-06 56.2 92 34.8
QL10p005853 Quercus lobata HOM05D000576 ORTHO05D000368 2.1e-06 56.2 98 37.8
FAN19G2457 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.7e-06 55.8 90 33.3
HanXRQChr09g0251901 Helianthus annuus HOM05D000576 ORTHO05D000368 2.7e-06 55.8 83 33.7
COL.COLO4_37401 Corchorus olitorius HOM05D004624 ORTHO05D005357 3.6e-06 55.5 84 39.3
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 3.6e-06 55.5 99 32.3
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 3.6e-06 55.5 92 33.7
HanXRQChr09g0252251 Helianthus annuus HOM05D000576 ORTHO05D000368 4.7e-06 55.1 98 33.7
FvH4_1g04271 Fragaria vesca HOM05D000576 ORTHO05D000368 6.1e-06 54.7 99 32.3


User provided reference genes

Program Settings