Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 7.6e-172 607.1 303 100.0
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.2e-161 573.2 327 89.9
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.0e-136 490.3 286 88.8
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 4.4e-127 458.4 328 71.3
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 1.4e-125 453.4 328 71.0
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 3.9e-120 435.3 328 68.0
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 3.3e-119 432.2 328 65.5
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 4.4e-119 431.8 328 67.4
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 1.1e-117 427.2 328 65.5
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 4.1e-117 425.2 328 67.1
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 2.0e-116 422.9 328 64.9
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 3.5e-116 422.2 328 65.5
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 8.5e-115 417.5 329 64.1
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 1.1e-114 417.2 329 64.1
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.9e-114 416.4 328 64.3
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 1.6e-113 413.3 328 63.4
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 2.7e-113 412.5 328 64.0
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 3.6e-113 412.1 328 62.8
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 4.7e-113 411.8 328 63.7
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 8.0e-113 411.0 328 64.6
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 1.0e-112 410.6 328 61.3
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 4.0e-112 408.7 329 62.6
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 5.2e-112 408.3 330 63.6
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 6.7e-112 407.9 329 62.6
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 6.7e-112 407.9 329 62.6
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 9.7e-111 404.1 328 61.6
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 1.3e-110 403.7 328 61.9
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 4.1e-109 398.7 328 62.5
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 9.1e-109 397.5 329 62.6
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 2.7e-108 396.0 328 59.5
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 4.5e-108 395.2 328 60.7
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 5.9e-108 394.8 329 61.7
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 1.0e-107 394.0 329 58.1
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 1.3e-107 393.7 328 61.9
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 2.9e-107 392.5 328 59.8
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 6.5e-107 391.3 328 61.6
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 9.4e-106 387.5 323 57.9
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 2.7e-105 386.0 328 61.0
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 3.6e-105 385.6 329 60.2
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 6.1e-105 384.8 328 61.6
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 1.8e-104 383.3 298 65.8
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 2.3e-104 382.9 329 56.8
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 4.0e-104 382.1 328 57.6
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 6.8e-104 381.3 328 57.0
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.5e-103 380.2 328 57.0
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 1.5e-103 380.2 329 60.5
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 2.6e-103 379.4 328 56.7
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 4.4e-103 378.6 313 62.6
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 1.3e-102 377.1 310 58.4
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 1.3e-102 377.1 328 56.1
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 2.8e-102 375.9 328 55.8
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 2.0e-100 369.8 328 56.7
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 1.0e-99 367.5 329 55.0
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 1.7e-99 366.7 327 56.3
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 1.7e-99 366.7 325 59.7
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 2.9e-99 365.9 314 58.6
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 3.2e-98 362.5 310 61.3
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 3.6e-97 359.0 328 54.6
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 4.0e-96 355.5 318 57.2
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 4.0e-96 355.5 311 58.8
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 8.8e-96 354.4 328 55.2
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 2.0e-95 353.2 328 54.0
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 3.4e-95 352.4 328 57.3
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 1.1e-93 347.4 328 55.2
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 1.4e-93 347.1 328 53.7
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 1.4e-93 347.1 326 52.5
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 1.8e-93 346.7 325 56.0
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 4.1e-93 345.5 328 53.0
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 5.4e-93 345.1 328 53.7
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 1.2e-92 344.0 328 54.0
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 1.2e-92 344.0 328 53.4
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 2.0e-92 343.2 328 53.4
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 3.5e-92 342.4 328 53.4
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 4.5e-92 342.0 328 53.0
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 4.5e-92 342.0 329 55.9
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 7.3e-90 334.7 306 57.8
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 1.2e-89 334.0 320 53.1
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 1.4e-88 330.5 328 54.0
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 3.0e-88 329.3 328 56.1
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 2.6e-87 326.2 371 50.9
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 4.4e-87 325.5 327 53.2
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 9.8e-87 324.3 246 67.1
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 8.3e-86 321.2 328 49.4
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 7.0e-85 318.2 332 49.4
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 2.0e-84 316.6 327 53.5
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 2.7e-84 316.2 328 52.7
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 6.6e-83 311.6 328 52.7
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 2.5e-82 309.7 328 48.8
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 2.0e-79 300.1 302 54.3
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 5.4e-77 292.0 246 58.5
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 2.0e-76 290.0 330 46.4
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 6.6e-75 285.0 232 62.9
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 2.5e-74 283.1 328 47.3
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 3.3e-74 282.7 330 45.5
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 1.4e-72 277.3 301 51.2
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 1.2e-71 274.2 208 67.3
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 2.2e-70 270.0 248 56.5
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 2.2e-70 270.0 208 65.4
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 1.6e-65 253.8 299 47.5
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 4.7e-65 252.3 218 58.7
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 1.8e-64 250.4 291 46.7
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 1.0e-59 234.6 242 52.5
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 4.2e-53 212.6 205 55.6
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 2.1e-41 173.7 304 38.5
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 9.9e-39 164.9 190 48.9
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 2.4e-37 160.2 150 55.3
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 5.1e-27 125.9 199 41.2
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 3.3e-26 123.2 230 33.9
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 5.1e-19 99.4 207 33.3
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 2.5e-18 97.1 173 37.0
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 3.2e-13 80.1 174 32.8
Sabra06G0059400 Salix brachista HOM05D007036 ORTHO05D008885 6.3e-09 65.9 117 34.2
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 7.0e-08 62.4 246 26.8


User provided reference genes

Program Settings