Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.5e-116 424.1 845 100.0
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.6e-81 308.5 202 83.7
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 7.2e-79 299.7 188 85.6
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 6.8e-69 266.5 203 74.4
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 8.8e-69 266.2 206 74.3
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 1.0e-64 252.7 206 67.5
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.3e-64 251.5 194 73.2
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 1.5e-63 248.8 202 67.8
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 1.4e-61 242.3 206 63.6
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.0e-61 241.1 151 85.4
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.0e-61 241.1 151 85.4
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 2.0e-60 238.4 206 65.5
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 8.3e-59 233.0 175 75.4
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 5.4e-58 230.3 206 61.7
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 7.0e-58 229.9 206 61.7
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 2.0e-57 228.4 188 65.4
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 1.7e-56 225.3 202 61.4
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 2.3e-56 224.9 201 62.2
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 1.9e-55 221.9 201 61.2
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 2.5e-55 221.5 201 60.7
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 3.3e-55 221.1 199 65.3
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 4.3e-55 220.7 197 65.0
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 7.3e-55 219.9 195 64.1
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 1.6e-54 218.8 181 64.6
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.0e-53 216.1 197 61.9
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 2.3e-53 214.9 206 59.2
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 2.3e-53 214.9 190 63.2
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 3.1e-53 214.5 208 58.7
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 4.0e-53 214.2 200 60.0
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 1.2e-52 212.6 188 61.2
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 5.8e-52 210.3 201 58.7
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 5.8e-52 210.3 197 59.9
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 5.8e-52 210.3 196 62.2
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 7.5e-52 209.9 206 59.2
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 1.3e-51 209.1 197 59.4
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 1.3e-51 209.1 179 66.5
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 2.2e-51 208.4 193 60.6
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 2.9e-51 208.0 197 59.9
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 3.7e-51 207.6 199 57.3
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 6.4e-51 206.8 179 62.0
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 6.4e-51 206.8 179 62.0
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 8.3e-51 206.5 206 55.8
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 1.9e-50 205.3 200 58.0
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 5.4e-50 203.8 195 57.9
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 9.2e-50 203.0 169 63.9
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 9.2e-50 203.0 203 56.2
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 1.2e-49 202.6 176 60.2
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 1.2e-49 202.6 199 57.8
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 3.5e-49 201.1 197 55.8
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 1.0e-48 199.5 179 60.9
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 3.0e-48 198.0 198 58.6
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 6.6e-48 196.8 199 58.3
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 8.6e-48 196.4 179 59.2
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 8.6e-48 196.4 171 62.6
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 8.6e-48 196.4 201 55.7
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 3.3e-47 194.5 206 55.3
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 5.6e-47 193.7 200 56.5
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 1.2e-46 192.6 197 55.8
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 4.7e-46 190.7 191 58.6
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 4.7e-46 190.7 196 54.6
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 8.1e-46 189.9 194 56.7
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 1.8e-45 188.7 193 55.4
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 3.1e-45 188.0 163 61.3
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 6.8e-45 186.8 200 54.0
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 2.0e-44 185.3 206 53.4
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 5.8e-44 183.7 196 53.6
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 9.8e-44 183.0 191 55.0
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 1.3e-43 182.6 198 55.1
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 2.2e-43 181.8 211 49.3
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 3.7e-43 181.0 159 58.5
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 4.9e-43 180.6 186 54.3
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 8.3e-43 179.9 204 53.4
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.1e-42 179.5 139 73.4
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 7.1e-42 176.8 204 51.0
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 2.7e-41 174.9 158 57.0
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 3.5e-41 174.5 170 55.9
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 6.0e-41 173.7 176 59.7
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 6.0e-41 173.7 171 55.0
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 6.0e-41 173.7 168 54.8
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 2.3e-40 171.8 207 47.8
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 2.5e-39 168.3 162 58.0
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 2.8e-38 164.9 195 50.8
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 5.2e-37 160.6 151 58.9
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 2.6e-36 158.3 137 59.9
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 5.8e-36 157.1 149 59.1
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 4.1e-34 151.0 120 68.3
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 5.4e-34 150.6 129 65.1
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 7.1e-34 150.2 129 64.3
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.2e-33 149.4 167 53.3
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 4.6e-33 147.5 172 51.7
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 2.3e-32 145.2 171 49.7
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 3.0e-32 144.8 174 49.4
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 1.5e-31 142.5 162 51.9
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 1.9e-31 142.1 164 49.4
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 7.3e-31 140.2 167 51.5
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 4.7e-30 137.5 171 49.7
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 4.7e-30 137.5 168 50.6
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 4.7e-30 137.5 168 50.6
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 4.7e-30 137.5 116 64.7
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 8.1e-30 136.7 157 51.0
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 1.1e-29 136.3 160 47.5
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 5.8e-28 130.6 147 52.4
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 9.9e-28 129.8 159 48.4
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 2.9e-27 128.3 107 64.5
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 7.1e-26 123.6 156 50.6
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 6.0e-25 120.6 131 51.1
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 1.7e-24 119.0 116 58.6
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 6.6e-24 117.1 165 44.2
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 6.6e-24 117.1 129 52.7
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 1.1e-23 116.3 118 54.2
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 1.9e-23 115.5 155 45.8
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 3.3e-23 114.8 116 56.9
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 9.6e-23 113.2 162 44.4
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 2.1e-22 112.1 161 44.7
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 3.6e-22 111.3 134 44.8
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 4.0e-21 107.8 129 45.7
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 5.4e-18 97.4 105 54.3
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 2.1e-17 95.5 208 36.5
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 6.9e-13 80.5 101 50.5
CSS0031354 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.6e-12 78.6 41 85.4
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.3e-11 76.3 130 37.7
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 1.7e-11 75.9 60 61.7
BcaNung03117 Brassica carinata HOM05D006008 ORTHO05D007334 1.1e-10 73.2 69 56.5
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 3.0e-08 65.1 46 73.9
CSS0041429 Camellia sinensis var. sinensis HOM05D043594 ORTHO05D111255 4.3e-07 61.2 34 88.2
CSS0019653 Camellia sinensis var. sinensis HOM05D043594 ORTHO05D113038 4.8e-06 57.8 33 81.8


User provided reference genes

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