Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 6.2e-106 387.5 200 100.0
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 1.1e-54 217.2 205 63.9
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 3.7e-42 175.6 202 55.9
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 2.4e-41 172.9 207 54.6
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 1.9e-38 163.3 202 51.5
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 2.6e-35 152.9 208 49.0
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 1.8e-33 146.7 204 50.5
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 6.6e-31 138.3 151 58.3
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 6.6e-31 138.3 204 47.1
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 1.6e-29 133.7 214 46.3
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 2.3e-28 129.8 203 46.3
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 1.2e-27 127.5 208 43.8
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 1.5e-27 127.1 206 43.7
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 7.5e-27 124.8 208 42.8
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 9.8e-27 124.4 202 43.6
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 1.3e-26 124.0 222 41.0
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 1.7e-26 123.6 203 44.3
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 6.4e-26 121.7 203 42.4
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 5.4e-25 118.6 204 42.2
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 5.4e-25 118.6 212 42.0
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 1.2e-24 117.5 202 45.0
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 2.0e-24 116.7 202 44.1
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 7.8e-24 114.8 205 41.0
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 2.3e-23 113.2 210 40.0
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 1.5e-22 110.5 166 47.0
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 1.9e-22 110.2 212 39.2
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 2.5e-22 109.8 206 40.8
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 2.5e-22 109.8 181 42.5
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 1.2e-21 107.5 175 41.7
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 1.6e-21 107.1 208 38.9
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 2.8e-21 106.3 180 45.0
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 1.1e-20 104.4 190 41.6
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 1.1e-20 104.4 158 46.8
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 2.3e-20 103.2 192 39.6
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 3.2e-17 92.8 166 42.2
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 7.1e-17 91.7 177 40.7
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 6.0e-16 88.6 166 39.2
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 3.0e-15 86.3 148 39.2
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 2.5e-14 83.2 202 32.7
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 2.1e-13 80.1 177 37.3
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 3.1e-12 76.3 98 42.9
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 3.1e-12 76.3 238 30.7
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 2.2e-10 70.1 119 48.7
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 2.9e-10 69.7 190 32.1
Aa31LG1G10630 Aethionema arabicum HOM05D000567 ORTHO05D001981 8.7e-07 58.2 153 32.0
Eucgr.E00047 Eucalyptus grandis HOM05D000567 ORTHO05D001981 1.1e-06 57.8 162 27.8
Carub.0001s0095 Capsella rubella HOM05D000567 ORTHO05D001981 1.5e-06 57.4 149 32.2
BcaB03g13569 Brassica carinata HOM05D000567 ORTHO05D001981 1.9e-06 57.0 148 33.1
Sp1g01020 Schrenkiella parvula HOM05D000567 ORTHO05D001981 1.9e-06 57.0 149 30.9
AT1G01260 Arabidopsis thaliana HOM05D000567 ORTHO05D001981 3.3e-06 56.2 149 31.5
Oeu007884.1 Olea europaea HOM05D000567 ORTHO05D001981 3.3e-06 56.2 151 27.2
A10p00640 Brassica napus HOM05D000567 ORTHO05D001981 7.3e-06 55.1 151 31.1
Solyc02g091820.3 Solanum lycopersicum HOM05D000670 ORTHO05D000529 7.3e-06 55.1 138 29.0
Sopen02g036400 Solanum pennellii HOM05D000670 ORTHO05D000529 7.3e-06 55.1 138 29.0
HPP92_010291 Vanilla planifolia HOM05D002911 ORTHO05D002958 7.3e-06 55.1 142 28.9
Hma1.2p1_2910F.1_g330160 Hydrangea macrophylla HOM05D000567 ORTHO05D001981 9.6e-06 54.7 148 31.1
Psat4g079600 Pisum sativum HOM05D000670 ORTHO05D000529 9.6e-06 54.7 191 27.7
unitig_22.g5501 Utricularia gibba HOM05D000567 ORTHO05D000767 9.6e-06 54.7 182 28.6


User provided reference genes

Program Settings