Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018807 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 2.5e-86 322.4 205 100.0
CSS0033231 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 1.3e-55 220.3 205 66.3
Rhsim12G0004300 Rhododendron simsii HOM05D005534 ORTHO05D006642 6.9e-52 208.0 198 59.6
CSS0044704 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 1.5e-51 206.8 198 61.6
vmacro00924 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 3.4e-51 205.7 198 59.1
Dinv18373 Davidia involucrata HOM05D005534 ORTHO05D006642 7.7e-51 204.5 198 59.1
Actinidia23022 Actinidia chinensis HOM05D005534 ORTHO05D006642 2.9e-50 202.6 198 59.1
Haze_13929 Corylus avellana HOM05D005534 ORTHO05D006642 5.0e-50 201.8 199 58.3
Hund26700 Selenicereus undatus HOM05D005534 ORTHO05D006642 8.5e-50 201.1 194 58.2
EL10Ac1g01529 Beta vulgaris HOM05D005534 ORTHO05D006642 1.4e-49 200.3 198 58.6
TAR381G0138 Trochodendron aralioides HOM05D005534 ORTHO05D006642 1.9e-49 199.9 198 58.1
MBI06_g06677_MAGBIO Magnolia biondii HOM05D005534 ORTHO05D006642 2.5e-49 199.5 198 57.1
Aa31LG7G6790 Aethionema arabicum HOM05D005534 ORTHO05D006642 4.2e-49 198.7 202 55.4
CAN.G911.34 Capsicum annuum HOM05D005534 ORTHO05D006642 4.2e-49 198.7 198 56.6
TWI18G0032 Tripterygium wilfordii HOM05D005534 ORTHO05D006642 4.2e-49 198.7 196 57.1
CiPaw.04G011000 Carya illinoinensis HOM05D005534 ORTHO05D006642 5.5e-49 198.4 198 57.1
Sc19g0002770 Simmondsia chinensis HOM05D005534 ORTHO05D006642 7.2e-49 198.0 196 58.2
GSVIVG01036434001 Vitis vinifera HOM05D005534 ORTHO05D006642 7.2e-49 198.0 198 57.6
Atru.chr13.2420 Acer truncatum HOM05D005534 ORTHO05D006642 9.4e-49 197.6 198 57.1
RcHm_v2.0_Chr7g0231231 Rosa chinensis HOM05D005534 ORTHO05D006642 9.4e-49 197.6 198 56.1
PGSC0003DMG401019416 Solanum tuberosum HOM05D005534 ORTHO05D006642 1.2e-48 197.2 198 56.6
Gohir.A13G117400 Gossypium hirsutum HOM05D005534 ORTHO05D006642 2.1e-48 196.4 198 56.1
Solyc10g012160.3 Solanum lycopersicum HOM05D005534 ORTHO05D006642 2.7e-48 196.1 198 55.6
FvH4_5g33060 Fragaria vesca HOM05D005534 ORTHO05D006642 3.6e-48 195.7 198 55.6
Gohir.D13G120700 Gossypium hirsutum HOM05D005534 ORTHO05D006642 3.6e-48 195.7 198 56.1
Gorai.013G134900 Gossypium raimondii HOM05D005534 ORTHO05D006642 3.6e-48 195.7 198 56.1
Sopen10g005920 Solanum pennellii HOM05D005534 ORTHO05D006642 3.6e-48 195.7 198 55.6
Ciclev10020832m.g Citrus clementina HOM05D005534 ORTHO05D006642 4.6e-48 195.3 198 56.6
ECA234G3974 Erigeron canadensis HOM05D005534 ORTHO05D006642 4.6e-48 195.3 198 55.6
Nn1g07947 Nelumbo nucifera HOM05D005534 ORTHO05D006642 4.6e-48 195.3 198 57.1
Nitab4.5_0000731g0130 Nicotiana tabacum HOM05D005534 ORTHO05D006642 4.6e-48 195.3 198 56.6
Prupe.1G530500 Prunus persica HOM05D005534 ORTHO05D006642 6.1e-48 194.9 198 56.1
QL09p004039 Quercus lobata HOM05D005534 ORTHO05D006642 6.1e-48 194.9 198 55.1
Duzib177G1179 Durio zibethinus HOM05D005534 ORTHO05D006642 7.9e-48 194.5 198 55.6
Migut.J01545 Erythranthe guttata HOM05D005534 ORTHO05D006642 7.9e-48 194.5 198 56.1
Duzib177G1161 Durio zibethinus HOM05D005534 ORTHO05D006642 1.0e-47 194.1 199 55.3
Manes.18G119700 Manihot esculenta HOM05D005534 ORTHO05D006642 1.0e-47 194.1 198 57.1
Medtr3g005730 Medicago truncatula HOM05D005534 ORTHO05D006642 1.0e-47 194.1 198 55.6
SGA_v2.0_scaffold69G23189 Striga asiatica HOM05D005534 ORTHO05D006642 1.0e-47 194.1 198 57.1
CDE02G4760 Ceratophyllum demersum HOM05D005534 ORTHO05D006642 1.4e-47 193.7 198 57.6
AUR62026718 Chenopodium quinoa HOM05D005534 ORTHO05D006642 1.4e-47 193.7 196 56.1
Lj1A297T60 Lonicera japonica HOM05D005534 ORTHO05D006642 2.3e-47 193.0 204 53.9
Nitab4.5_0006008g0020 Nicotiana tabacum HOM05D005534 ORTHO05D006642 2.3e-47 193.0 198 56.1
QL09p002970 Quercus lobata HOM05D005534 ORTHO05D006642 2.3e-47 193.0 198 54.5
AUR62013571 Chenopodium quinoa HOM05D005534 ORTHO05D006642 3.9e-47 192.2 196 55.6
Potri.013G101700 Populus trichocarpa HOM05D005534 ORTHO05D006642 3.9e-47 192.2 198 57.1
SalBow6G6434 Salvia bowleyana HOM05D005534 ORTHO05D006642 3.9e-47 192.2 198 56.6
THA.LOC104800087 Tarenaya hassleriana HOM05D005534 ORTHO05D006642 3.9e-47 192.2 198 56.1
Peaxi162Scf00065g00017 Petunia axillaris HOM05D005534 ORTHO05D006642 5.1e-47 191.8 198 55.1
Thecc.08G173200 Theobroma cacao HOM05D005534 ORTHO05D006642 6.7e-47 191.4 198 55.1
arahy.Tifrunner.gnm1.ann1.A8RPUL Arachis hypogaea HOM05D005534 ORTHO05D006642 8.8e-47 191.0 202 55.4
MD15G1399100 Malus domestica HOM05D005534 ORTHO05D006642 8.8e-47 191.0 199 54.8
Cc00_g25290 Coffea canephora HOM05D005534 ORTHO05D006642 1.1e-46 190.7 196 56.6
PSO017G6214 Papaver somniferum HOM05D005534 ORTHO05D006642 2.0e-46 189.9 198 55.1
Psat1g000160 Pisum sativum HOM05D005534 ORTHO05D006642 2.6e-46 189.5 198 55.1
Sp1g20290 Schrenkiella parvula HOM05D005534 ORTHO05D006642 2.6e-46 189.5 198 54.0
MSTRG.6297 Avicennia marina HOM05D005534 ORTHO05D006642 3.3e-46 189.1 198 55.6
AL1G36350 Arabidopsis lyrata HOM05D005534 ORTHO05D006642 5.7e-46 188.3 198 54.5
Lsat_1_v5_gn_5_78481 Lactuca sativa HOM05D005534 ORTHO05D006642 5.7e-46 188.3 198 53.5
ATR0681G326 Amborella trichopoda HOM05D005534 ORTHO05D006642 7.4e-46 188.0 198 53.5
Carub.0001s2231 Capsella rubella HOM05D005534 ORTHO05D006642 7.4e-46 188.0 198 54.0
CARHR023160 Cardamine hirsuta HOM05D005534 ORTHO05D006642 7.4e-46 188.0 198 54.0
MD08G1215200 Malus domestica HOM05D005534 ORTHO05D006642 7.4e-46 188.0 199 53.8
Lj1A290T42 Lonicera japonica HOM05D005534 ORTHO05D006642 9.7e-46 187.6 196 55.1
BcaNung06443 Brassica carinata HOM05D005534 ORTHO05D006642 1.3e-45 187.2 198 53.5
MD04G1240000 Malus domestica HOM05D005534 ORTHO05D006642 1.3e-45 187.2 198 54.0
arahy.Tifrunner.gnm1.ann1.H1ATJ8 Arachis hypogaea HOM05D005534 ORTHO05D006642 1.7e-45 186.8 200 55.0
CsaV3_5G040210 Cucumis sativus L. HOM05D005534 ORTHO05D006642 2.2e-45 186.4 198 54.5
AT1G22800 Arabidopsis thaliana HOM05D005534 ORTHO05D006642 3.7e-45 185.7 196 54.1
BraA09t39683Z Brassica rapa HOM05D005534 ORTHO05D006642 6.3e-45 184.9 204 52.9
Eucgr.F04073 Eucalyptus grandis HOM05D005534 ORTHO05D006642 6.3e-45 184.9 198 53.5
Thhalv10007396m.g Eutrema salsugineum HOM05D005534 ORTHO05D006642 6.3e-45 184.9 196 53.6
PGR044G1073 Punica granatum HOM05D005534 ORTHO05D006642 1.4e-44 183.7 229 48.0
TPR.G25542 Trifolium pratense HOM05D005534 ORTHO05D006642 2.4e-44 183.0 199 54.3
VMungo1080G0932 Vigna mungo HOM05D005534 ORTHO05D006642 2.4e-44 183.0 198 52.5
ClCG08G000650 Citrullus lanatus HOM05D005534 ORTHO05D006642 3.1e-44 182.6 198 53.0
Lj3g0019199 Lotus japonicus HOM05D005534 ORTHO05D006642 3.1e-44 182.6 198 52.5
Sed0013677 Sechium edule HOM05D005534 ORTHO05D006642 4.1e-44 182.2 210 51.0
PSO170G0367 Papaver somniferum HOM05D005534 ORTHO05D006642 5.3e-44 181.8 199 54.8
BcaNung06107 Brassica carinata HOM05D005534 ORTHO05D006642 1.2e-43 180.6 198 53.5
A09p41950 Brassica napus HOM05D005534 ORTHO05D006642 1.2e-43 180.6 198 53.5
DCAR_022334 Daucus carota HOM05D005534 ORTHO05D006642 1.5e-43 180.3 198 53.0
Aqoxy2G03821 Aquilegia oxysepala HOM05D005534 ORTHO05D006642 2.6e-43 179.5 198 52.5
C05p21900 Brassica napus HOM05D005534 ORTHO05D006642 2.6e-43 179.5 198 53.0
Ca_13980_v3 Cicer arietinum L. HOM05D005534 ORTHO05D006642 4.5e-43 178.7 198 52.5
BolC5t30885H Brassica oleracea HOM05D005534 ORTHO05D006642 5.9e-43 178.3 198 52.5
Phvul.005G001600 Phaseolus vulgaris HOM05D005534 ORTHO05D006642 7.7e-43 177.9 198 51.5
Lalb_Chr07g0177551 Lupinus albus HOM05D005534 ORTHO05D006642 1.0e-42 177.6 198 52.5
Glyma.04G257200 Glycine max HOM05D005534 ORTHO05D006642 1.3e-42 177.2 198 52.5
Glyma.12G242500 Glycine max HOM05D005534 ORTHO05D006642 2.9e-42 176.0 198 52.0
COL.COLO4_05589 Corchorus olitorius HOM05D005534 ORTHO05D006642 3.8e-42 175.6 192 54.7
Potri.013G101900 Populus trichocarpa HOM05D005534 ORTHO05D006642 5.0e-42 175.3 200 55.0
SHI08987 Sapria himalayana HOM05D005534 ORTHO05D006642 6.5e-42 174.9 199 50.8
MELO3C022197.2 Cucumis melo HOM05D005534 ORTHO05D006642 2.5e-41 172.9 212 49.5
Sabra13G0088100 Salix brachista HOM05D005534 ORTHO05D006642 5.5e-41 171.8 186 54.3
Zm00001eb411080 Zea mays HOM05D005534 ORTHO05D006642 5.5e-41 171.8 196 52.6
HPP92_005621 Vanilla planifolia HOM05D005534 ORTHO05D006642 1.2e-40 170.6 198 50.0
Oeu034751.1 Olea europaea HOM05D005534 ORTHO05D006642 1.6e-40 170.2 245 44.9
Oeu034752.2 Olea europaea HOM05D005534 ORTHO05D006642 1.6e-40 170.2 245 44.9
HPP92_005624 Vanilla planifolia HOM05D005534 ORTHO05D006642 1.6e-40 170.2 198 50.5
HPP92_005612 Vanilla planifolia HOM05D005534 ORTHO05D006642 6.1e-40 168.3 198 49.5
vmacro22753 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 5.2e-39 165.2 192 51.6
Gohir.A13G117500 Gossypium hirsutum HOM05D005534 ORTHO05D006642 1.0e-34 151.0 124 66.1
unitig_899.g15650 Utricularia gibba HOM05D005534 ORTHO05D006642 3.8e-34 149.1 172 51.7
Hma1.2p1_0708F.1_g207130 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 6.1e-32 141.7 170 50.6
Mapoly0125s0040 Marchantia polymorpha HOM05D005534 ORTHO05D006642 1.0e-31 141.0 204 44.1
AagrBONN_evm.TU.Sc2ySwM_117.1319 Anthoceros agrestis HOM05D005534 ORTHO05D006642 4.0e-31 139.0 210 41.4
Pp3c3_32560 Physcomitrium patens HOM05D005534 ORTHO05D006642 5.2e-31 138.7 202 43.1
SMO232G0033 Selaginella moellendorffii HOM05D005534 ORTHO05D006642 1.6e-27 127.1 198 39.9
FAN18G2794 Fragaria x ananassa HOM05D005534 ORTHO05D006642 4.5e-27 125.6 196 40.3
Cre13.g584750 Chlamydomonas reinhardtii HOM05D005534 ORTHO05D006642 8.5e-26 121.3 124 53.2
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 1.1e-25 120.9 124 49.2
SEGI_21404 Sequoiadendron giganteum HOM05D005534 ORTHO05D006642 1.5e-25 120.6 170 44.1
TPR.G30718 Trifolium pratense HOM05D005534 ORTHO05D006642 5.4e-20 102.1 197 37.6
PRCOL_00005850 Prasinoderma coloniale HOM05D005534 ORTHO05D006642 2.7e-19 99.8 122 45.9
CANSAT25G1946 Cannabis sativa HOM05D005534 ORTHO05D006642 1.2e-16 90.9 95 54.7
CANSAT25G1380 Cannabis sativa HOM05D005534 ORTHO05D006642 1.0e-15 87.8 45 91.1
Cfa025826 Carpinus fangiana HOM05D005534 ORTHO05D006642 5.2e-15 85.5 124 38.7
Cpa.g.sc438.5 Carica papaya HOM05D005534 ORTHO05D006642 7.5e-14 81.6 196 33.2
A07p14190 Brassica napus HOM05D005534 ORTHO05D006642 2.8e-13 79.7 52 76.9
Zm00001eb320410 Zea mays HOM05D005534 ORTHO05D006642 5.0e-10 68.9 141 36.2
Glyma.04G256001 Glycine max HOM05D005534 ORTHO05D006642 1.1e-09 67.8 141 35.5
Os12g0203100 Oryza sativa ssp. japonica HOM05D005534 ORTHO05D006642 4.7e-08 62.4 91 41.8
Hma1.2p1_0708F.1_g207140 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 6.8e-07 58.5 30 86.7
C07p20870 Brassica napus HOM05D005534 ORTHO05D006642 8.9e-07 58.2 31 83.9
BolC7t42620H Brassica oleracea HOM05D005534 ORTHO05D006642 8.9e-07 58.2 31 83.9


User provided reference genes

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