Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018794 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 6.5e-28 126.7 66 100.0
CSS0041715 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 5.9e-13 77.0 92 53.3
CSS0035617 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.6e-10 67.8 36 97.2
CSS0021115 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 4.7e-10 67.4 36 94.4
CSS0044029 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.3e-09 65.1 35 94.3
CSS0008945 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 4.0e-09 64.3 35 94.3
CSS0038513 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.4e-08 61.2 36 86.1
Nitab4.5_0007473g0010 Nicotiana tabacum HOM05D007824 ORTHO05D009875 7.5e-08 60.1 36 86.1
CiPaw.07G233700 Carya illinoinensis HOM05D007824 ORTHO05D009875 4.9e-07 57.4 36 83.3
CiPaw.08G004000 Carya illinoinensis HOM05D007824 ORTHO05D009875 4.9e-07 57.4 36 80.6
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 6.4e-07 57.0 36 80.6
Oeu030057.1 Olea europaea HOM05D007824 ORTHO05D009875 8.3e-07 56.6 36 80.6
Eucgr.C04026 Eucalyptus grandis HOM05D007824 ORTHO05D009875 1.4e-06 55.8 32 84.4
Manes.03G006300 Manihot esculenta HOM05D007824 ORTHO05D009875 1.4e-06 55.8 36 77.8
Solyc08g006580.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 1.4e-06 55.8 34 82.4
PGSC0003DMG402026306 Solanum tuberosum HOM05D007824 ORTHO05D009875 1.4e-06 55.8 34 82.4
Sc23g0006310 Simmondsia chinensis HOM05D007824 ORTHO05D009875 3.2e-06 54.7 39 79.5
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 4.1e-06 54.3 36 75.0
Migut.A00397 Erythranthe guttata HOM05D007824 ORTHO05D009875 5.4e-06 53.9 36 77.8
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 9.2e-06 53.1 36 75.0
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 9.2e-06 53.1 36 72.2
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 9.2e-06 53.1 36 72.2


User provided reference genes

Program Settings