Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018787 Camellia sinensis var. sinensis HOM05D004524 ORTHO05D005477 6.4e-216 753.8 387 100.0
Rhsim08G0108900 Rhododendron simsii HOM05D004524 ORTHO05D005477 3.6e-134 482.3 373 70.0
Dinv26770 Davidia involucrata HOM05D004524 ORTHO05D005477 5.4e-130 468.4 373 68.4
Lj7A15G49 Lonicera japonica HOM05D004524 ORTHO05D005477 8.1e-102 374.8 372 57.0
vmacro17889 Vaccinium macrocarpon HOM05D004524 ORTHO05D005477 2.9e-91 339.7 367 54.2
TAR628G0958 Trochodendron aralioides HOM05D004524 ORTHO05D005477 1.1e-90 337.8 411 50.4
GSVIVG01005092001 Vitis vinifera HOM05D004524 ORTHO05D005477 6.9e-85 318.5 379 51.2
Cc07_g05430 Coffea canephora HOM05D004524 ORTHO05D005477 1.1e-79 301.2 381 46.5
Prupe.7G144700 Prunus persica HOM05D004524 ORTHO05D005477 6.2e-78 295.4 381 48.0
Thecc.01G046200 Theobroma cacao HOM05D004524 ORTHO05D005477 6.2e-78 295.4 374 48.9
CiPaw.01G027900 Carya illinoinensis HOM05D004524 ORTHO05D005477 2.0e-76 290.4 353 49.9
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 3.4e-76 289.7 380 48.4
Atru.chr3.464 Acer truncatum HOM05D004524 ORTHO05D005477 7.1e-74 282.0 381 45.9
DCAR_025673 Daucus carota HOM05D004524 ORTHO05D005477 2.3e-72 276.9 393 42.5
Manes.13G131650 Manihot esculenta HOM05D004524 ORTHO05D005477 3.9e-72 276.2 374 43.9
Ciclev10024678m.g Citrus clementina HOM05D004524 ORTHO05D005477 7.4e-71 271.9 374 44.9
Duzib187G1201 Durio zibethinus HOM05D004524 ORTHO05D005477 8.2e-70 268.5 377 46.4
FvH4_1g14580 Fragaria vesca HOM05D004524 ORTHO05D005477 8.2e-70 268.5 387 44.4
FAN19G0876 Fragaria x ananassa HOM05D004524 ORTHO05D005477 1.1e-69 268.1 387 44.4
Haze_15174 Corylus avellana HOM05D004524 ORTHO05D005477 2.4e-69 266.9 378 44.2
MSTRG.23802 Avicennia marina HOM05D004524 ORTHO05D005477 7.6e-68 261.9 375 42.7
FAN23G1697 Fragaria x ananassa HOM05D004524 ORTHO05D005477 2.2e-67 260.4 386 43.8
Oeu032928.5 Olea europaea HOM05D004524 ORTHO05D005477 2.9e-67 260.0 381 42.8
Hund14111 Selenicereus undatus HOM05D004524 ORTHO05D005477 4.9e-67 259.2 382 42.4
Sopen02g034830 Solanum pennellii HOM05D004524 ORTHO05D005477 1.9e-66 257.3 393 42.2
AUR62027229 Chenopodium quinoa HOM05D004524 ORTHO05D005477 2.5e-66 256.9 389 42.7
RcHm_v2.0_Chr2g0103341 Rosa chinensis HOM05D004524 ORTHO05D005477 3.2e-66 256.5 395 41.5
Nn5g29420 Nelumbo nucifera HOM05D004524 ORTHO05D005477 5.5e-66 255.8 391 42.7
Glyma.16G144200 Glycine max HOM05D004524 ORTHO05D005477 4.6e-65 252.7 375 43.7
HanXRQChr12g0378491 Helianthus annuus HOM05D004524 ORTHO05D005477 4.6e-65 252.7 369 43.9
AUR62003242 Chenopodium quinoa HOM05D004524 ORTHO05D005477 1.3e-64 251.1 388 42.0
Gohir.D11G194900 Gossypium hirsutum HOM05D004524 ORTHO05D005477 1.8e-64 250.8 376 45.2
Gorai.007G208400 Gossypium raimondii HOM05D004524 ORTHO05D005477 1.8e-64 250.8 376 45.2
TWI53G1766 Tripterygium wilfordii HOM05D004524 ORTHO05D005477 3.0e-64 250.0 367 42.2
CAN.G836.24 Capsicum annuum HOM05D004524 ORTHO05D005477 3.9e-64 249.6 382 42.4
Lsat_1_v5_gn_3_94181 Lactuca sativa HOM05D004524 ORTHO05D005477 6.7e-64 248.8 371 44.2
FAN26G3430 Fragaria x ananassa HOM05D004524 ORTHO05D005477 8.7e-64 248.4 357 44.5
ECA246G4564 Erigeron canadensis HOM05D004524 ORTHO05D005477 1.1e-63 248.1 374 41.2
Gohir.A11G188400 Gossypium hirsutum HOM05D004524 ORTHO05D005477 3.3e-63 246.5 373 44.0
ClCG01G016470 Citrullus lanatus HOM05D004524 ORTHO05D005477 7.4e-63 245.4 383 41.5
Migut.H00497 Erythranthe guttata HOM05D004524 ORTHO05D005477 9.7e-63 245.0 378 40.2
THA.LOC104827123 Tarenaya hassleriana HOM05D004524 ORTHO05D005477 1.3e-62 244.6 369 41.5
MD02G1159300 Malus domestica HOM05D004524 ORTHO05D005477 8.2e-62 241.9 373 42.1
PGR102G0585 Punica granatum HOM05D004524 ORTHO05D005477 1.4e-61 241.1 375 40.3
Sc16g0001530 Simmondsia chinensis HOM05D004524 ORTHO05D005477 4.1e-61 239.6 387 40.8
Aqoxy5G01755 Aquilegia oxysepala HOM05D004524 ORTHO05D005477 2.0e-60 237.3 393 38.4
CANSAT01G1357 Cannabis sativa HOM05D004524 ORTHO05D005477 2.0e-60 237.3 377 40.8
Sabra07G0030300 Salix brachista HOM05D004524 ORTHO05D005477 2.2e-59 233.8 377 42.2
Sed0025355 Sechium edule HOM05D004524 ORTHO05D005477 5.0e-59 232.6 381 40.7
arahy.Tifrunner.gnm1.ann1.7NUW0V Arachis hypogaea HOM05D004524 ORTHO05D005477 1.1e-58 231.5 375 41.1
EL10Ac6g14835 Beta vulgaris HOM05D004524 ORTHO05D005477 1.9e-58 230.7 408 39.0
VMungo0251G1417 Vigna mungo HOM05D004524 ORTHO05D005477 7.2e-58 228.8 379 40.6
Phvul.003G249100 Phaseolus vulgaris HOM05D004524 ORTHO05D005477 1.2e-57 228.0 372 40.1
arahy.Tifrunner.gnm1.ann1.S59764 Arachis hypogaea HOM05D004524 ORTHO05D005477 2.7e-57 226.9 371 40.7
SGA_v2.0_scaffold15G07211 Striga asiatica HOM05D004524 ORTHO05D005477 1.8e-56 224.2 371 38.5
TPR.G11249 Trifolium pratense HOM05D004524 ORTHO05D005477 1.8e-56 224.2 382 41.4
Ca_22222_v3 Cicer arietinum L. HOM05D004524 ORTHO05D005477 5.1e-56 222.6 370 39.7
SalBow1G7798 Salvia bowleyana HOM05D004524 ORTHO05D005477 6.7e-56 222.2 373 38.6
Lalb_Chr05g0226951 Lupinus albus HOM05D004524 ORTHO05D005477 8.8e-56 221.9 376 40.2
Lj4g0019712 Lotus japonicus HOM05D004524 ORTHO05D005477 1.3e-54 218.0 370 40.3
BcaB05g23215 Brassica carinata HOM05D004524 ORTHO05D005477 2.2e-54 217.2 370 39.2
Cfa004228 Carpinus fangiana HOM05D004524 ORTHO05D005477 2.2e-54 217.2 295 45.8
MELO3C007516.2 Cucumis melo HOM05D004524 ORTHO05D005477 2.8e-54 216.9 380 39.2
AL5G30510 Arabidopsis lyrata HOM05D004524 ORTHO05D005477 4.1e-53 213.0 370 37.6
CsaV3_6G042750 Cucumis sativus L. HOM05D004524 ORTHO05D005477 4.1e-53 213.0 381 38.6
Thhalv10027614m.g Eutrema salsugineum HOM05D004524 ORTHO05D005477 1.2e-52 211.5 370 38.1
Psat0s4220g0040 Pisum sativum HOM05D004524 ORTHO05D005477 1.2e-52 211.5 377 39.8
Medtr8g078970 Medicago truncatula HOM05D004524 ORTHO05D005477 1.5e-52 211.1 378 39.4
AT3G50380 Arabidopsis thaliana HOM05D004524 ORTHO05D005477 2.0e-52 210.7 371 37.5
BcaC09g50025 Brassica carinata HOM05D004524 ORTHO05D005477 2.0e-52 210.7 370 37.6
A01p24160 Brassica napus HOM05D004524 ORTHO05D005477 2.6e-52 210.3 370 37.6
C01p29870 Brassica napus HOM05D004524 ORTHO05D005477 2.6e-52 210.3 370 37.6
BolC1t02927H Brassica oleracea HOM05D004524 ORTHO05D005477 2.6e-52 210.3 370 37.6
BraA01t02328Z Brassica rapa HOM05D004524 ORTHO05D005477 2.6e-52 210.3 370 37.6
Sp5g11790 Schrenkiella parvula HOM05D004524 ORTHO05D005477 4.5e-52 209.5 367 37.6
Carub.0005s1670 Capsella rubella HOM05D004524 ORTHO05D005477 7.7e-52 208.8 370 36.5
PSO170G3447 Papaver somniferum HOM05D004524 ORTHO05D005477 1.3e-51 208.0 378 39.4
Potri.007G034900 Populus trichocarpa HOM05D004524 ORTHO05D005477 1.1e-50 204.9 368 37.8
PSO700G0043 Papaver somniferum HOM05D004524 ORTHO05D005477 1.9e-50 204.1 384 38.8
CARHR159890 Cardamine hirsuta HOM05D004524 ORTHO05D005477 1.2e-49 201.4 369 37.1
Ah.02g126100 Amaranthus hybridus HOM05D004524 ORTHO05D005477 7.9e-49 198.7 405 37.0
Aa31LG4G18620 Aethionema arabicum HOM05D004524 ORTHO05D005477 1.4e-45 188.0 381 34.4
ATR0733G201 Amborella trichopoda HOM05D004524 ORTHO05D005477 3.1e-45 186.8 385 34.0
CDE01G0100 Ceratophyllum demersum HOM05D004524 ORTHO05D005477 8.0e-41 172.2 384 35.7
MBI16_g31331_MAGBIO Magnolia biondii HOM05D004524 ORTHO05D005477 1.3e-38 164.9 253 42.3
HPP92_018739 Vanilla planifolia HOM05D004524 ORTHO05D005477 3.8e-35 153.3 376 30.3
Zm00001eb030660 Zea mays HOM05D004524 ORTHO05D005477 3.6e-33 146.7 371 33.2
Cpa.g.sc15.79 Carica papaya HOM05D004524 ORTHO05D005477 2.0e-28 131.0 334 31.7
Solyc02g090130.4 Solanum lycopersicum HOM05D004524 ORTHO05D005477 8.5e-27 125.6 127 54.3
Actinidia04030 Actinidia chinensis HOM05D004524 ORTHO05D005477 8.8e-24 115.5 71 80.3
unitig_62.g23407 Utricularia gibba HOM05D004524 ORTHO05D005477 3.1e-21 107.1 261 29.9
AagrBONN_evm.TU.Sc2ySwM_344.2829 Anthoceros agrestis HOM05D004524 ORTHO05D005477 7.2e-18 95.9 298 26.5
Pp3c8_13080 Physcomitrium patens HOM05D004524 ORTHO05D005477 1.7e-14 84.7 284 27.5
Mapoly0053s0053 Marchantia polymorpha HOM05D004524 ORTHO05D005477 1.1e-13 82.0 293 28.0
Psat3g094640 Pisum sativum HOM05D004524 ORTHO05D005477 1.7e-11 74.7 64 54.7
Peaxi162Scf00535g00736 Petunia axillaris HOM05D004524 ORTHO05D005477 2.3e-11 74.3 136 36.0
Peaxi162Scf00535g00735 Petunia axillaris HOM05D004524 ORTHO05D005477 1.9e-10 71.2 57 59.6
COL.COLO4_22188 Corchorus olitorius HOM05D004524 ORTHO05D005477 2.1e-09 67.8 42 73.8
Nitab4.5_0001014g0150 Nicotiana tabacum HOM05D004524 ORTHO05D005477 2.1e-09 67.8 125 36.0
Nitab4.5_0000108g0190 Nicotiana tabacum HOM05D004524 ORTHO05D005477 2.0e-07 61.2 125 34.4


User provided reference genes

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