Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018783 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D000032 2.0e-86 322.4 164 100.0
Dinv06057 Davidia involucrata HOM05D000317 ORTHO05D000032 1.8e-39 166.4 175 60.6
Dinv16438 Davidia involucrata HOM05D000317 ORTHO05D000032 2.3e-37 159.5 174 56.9
GSVIVG01000606001 Vitis vinifera HOM05D000317 ORTHO05D000032 1.5e-28 130.2 166 51.8
Gohir.A01G144100 Gossypium hirsutum HOM05D000317 ORTHO05D000032 1.9e-28 129.8 175 47.4
Gohir.D01G136600 Gossypium hirsutum HOM05D000317 ORTHO05D000032 2.8e-27 125.9 175 46.9
Gorai.002G169300 Gossypium raimondii HOM05D000317 ORTHO05D000032 2.8e-27 125.9 175 46.9
Duzib251G0747 Durio zibethinus HOM05D000317 ORTHO05D000032 2.6e-25 119.4 173 47.4
Hma1.2p1_0068F.1_g037200 Hydrangea macrophylla HOM05D000317 ORTHO05D000032 5.8e-25 118.2 175 47.4
Thecc.02G300000 Theobroma cacao HOM05D000317 ORTHO05D000032 7.5e-25 117.9 168 45.8
Duzib268G1562 Durio zibethinus HOM05D000317 ORTHO05D000032 9.9e-25 117.5 172 47.7
Manes.15G140900 Manihot esculenta HOM05D000317 ORTHO05D000032 2.2e-24 116.3 165 47.3
COL.COLO4_27544 Corchorus olitorius HOM05D000317 ORTHO05D000032 1.9e-23 113.2 176 44.9
Haze_10733 Corylus avellana HOM05D000317 ORTHO05D000032 1.9e-23 113.2 166 46.4
Nn4g24770 Nelumbo nucifera HOM05D000317 ORTHO05D000032 1.9e-23 113.2 167 47.9
Actinidia37477 Actinidia chinensis HOM05D000317 ORTHO05D000032 4.1e-23 112.1 170 47.1
CSS0043572 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D000032 1.2e-22 110.5 182 51.6
CiPaw.05G161200 Carya illinoinensis HOM05D000317 ORTHO05D000032 3.5e-22 109.0 167 48.5
QL03p040539 Quercus lobata HOM05D000317 ORTHO05D000032 3.5e-22 109.0 168 48.2
QL03p040909 Quercus lobata HOM05D000317 ORTHO05D000032 3.5e-22 109.0 168 48.2
CSS0047937 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D000032 1.0e-21 107.5 183 52.5
Cfa015090 Carpinus fangiana HOM05D000317 ORTHO05D000032 2.3e-21 106.3 165 46.1
Rhsim09G0081700 Rhododendron simsii HOM05D000317 ORTHO05D000032 3.0e-21 105.9 185 42.7
Oeu044062.2 Olea europaea HOM05D000317 ORTHO05D000032 1.1e-18 97.4 165 44.8
TAR629G0688 Trochodendron aralioides HOM05D000317 ORTHO05D000032 1.4e-18 97.1 164 44.5
VMungo0720G3101 Vigna mungo HOM05D000317 ORTHO05D000032 1.8e-18 96.7 164 39.6
TAR622G0919 Trochodendron aralioides HOM05D000317 ORTHO05D000032 6.8e-18 94.7 165 44.8
Cpa.g.sc2.82 Carica papaya HOM05D000317 ORTHO05D000032 1.2e-17 94.0 166 42.8
vmacro10763 Vaccinium macrocarpon HOM05D000317 ORTHO05D000032 2.6e-17 92.8 185 40.5
Phvul.007G019900 Phaseolus vulgaris HOM05D000317 ORTHO05D000032 4.4e-17 92.0 164 40.2
Duzib248G0583 Durio zibethinus HOM05D000317 ORTHO05D000032 7.6e-17 91.3 179 41.9
Manes.17G091800 Manihot esculenta HOM05D000317 ORTHO05D000032 1.7e-16 90.1 172 40.7
Atru.chr11.1032 Acer truncatum HOM05D000317 ORTHO05D000032 2.2e-16 89.7 178 37.6
Glyma.20G108600 Glycine max HOM05D000317 ORTHO05D000032 4.9e-16 88.6 164 39.6
Lj5g0012013 Lotus japonicus HOM05D000317 ORTHO05D000032 1.1e-15 87.4 172 40.7
Nitab4.5_0001777g0040 Nicotiana tabacum HOM05D000317 ORTHO05D000032 1.2e-14 84.0 164 39.0
Potri.010G099600 Populus trichocarpa HOM05D000317 ORTHO05D000032 1.2e-14 84.0 173 39.3
Potri.008G142000 Populus trichocarpa HOM05D000317 ORTHO05D000032 6.0e-14 81.6 172 37.8
Medtr1g112370 Medicago truncatula HOM05D000317 ORTHO05D000032 3.0e-13 79.3 176 36.9
Cc11_g04980 Coffea canephora HOM05D000317 ORTHO05D000032 5.1e-13 78.6 176 41.5
Prupe.1G340500 Prunus persica HOM05D000317 ORTHO05D000032 5.1e-13 78.6 173 37.6
DCAR_023529 Daucus carota HOM05D000084 ORTHO05D000032 6.6e-13 78.2 186 40.9
Oeu024848.1 Olea europaea HOM05D000317 ORTHO05D000032 1.1e-12 77.4 173 39.9
Gohir.D05G309100 Gossypium hirsutum HOM05D000317 ORTHO05D000032 4.3e-12 75.5 154 37.7
Gorai.009G329400 Gossypium raimondii HOM05D000317 ORTHO05D000032 4.3e-12 75.5 154 37.7
Sabra08G0107600 Salix brachista HOM05D000317 ORTHO05D000032 5.6e-12 75.1 174 37.9
Ciclev10005466m.g Citrus clementina HOM05D000317 ORTHO05D000032 7.3e-12 74.7 181 34.8
Aqoxy3G04164 Aquilegia oxysepala HOM05D000317 ORTHO05D000032 3.6e-11 72.4 142 38.0
Psat6g231680 Pisum sativum HOM05D000317 ORTHO05D000032 1.4e-10 70.5 138 39.1
Glyma.10G281000 Glycine max HOM05D000317 ORTHO05D000032 1.8e-10 70.1 108 44.4
TPR.G2485 Trifolium pratense HOM05D000317 ORTHO05D000032 2.6e-09 66.2 170 36.5
Gohir.A05G308400 Gossypium hirsutum HOM05D000317 ORTHO05D000032 5.8e-09 65.1 155 36.8
Lalb_Chr06g0163591 Lupinus albus HOM05D000317 ORTHO05D000032 7.6e-09 64.7 176 36.4
TWI74G0155 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 1.9e-07 60.1 173 35.8
Ca_11203_v3 Cicer arietinum L. HOM05D000317 ORTHO05D000032 4.2e-07 58.9 102 43.1
Glyma.20G006000 Glycine max HOM05D000317 ORTHO05D000032 2.1e-06 56.6 171 34.5
Glyma.07G158600 Glycine max HOM05D000317 ORTHO05D000032 2.7e-06 56.2 167 37.7
MBI08_g03395_MAGBIO Magnolia biondii HOM05D000317 ORTHO05D000032 4.6e-06 55.5 174 36.8
Medtr0223s0040 Medicago truncatula HOM05D000317 ORTHO05D000032 7.8e-06 54.7 120 39.2


User provided reference genes

Program Settings