Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006956 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 2.1e-97 359.0 181 100.0
CSS0018747 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 2.1e-97 359.0 181 100.0
CSS0038628 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 9.0e-88 327.0 188 91.0
CSS0030355 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 7.7e-87 323.9 188 90.4
vmacro12771 Vaccinium macrocarpon HOM05D017996 ORTHO05D017165 2.3e-27 126.3 165 49.7
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 1.7e-25 120.2 163 44.8
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 4.1e-24 115.5 168 45.2
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 2.6e-18 96.3 158 42.4
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 5.8e-18 95.1 134 44.8
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 4.3e-13 79.0 134 39.6
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 5.6e-13 78.6 160 35.6
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 2.8e-12 76.3 182 34.6
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 2.8e-12 76.3 166 36.7
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 4.7e-12 75.5 134 35.8
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 8.1e-12 74.7 108 46.3
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 1.8e-11 73.6 134 35.8
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 8.9e-11 71.2 182 32.4
FAN26G1572 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.0e-10 70.1 134 34.3
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 6.4e-09 65.1 131 35.1
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 5.4e-08 62.0 161 34.2
Sopen05g004330 Solanum pennellii HOM05D010873 ORTHO05D013124 2.7e-07 59.7 156 32.1
Atru.chr6.1276 Acer truncatum HOM05D017996 ORTHO05D017165 7.8e-07 58.2 143 37.1
Solyc05g008490.2 Solanum lycopersicum HOM05D010873 ORTHO05D013124 7.8e-07 58.2 156 31.4
Nitab4.5_0000350g0130 Nicotiana tabacum HOM05D010873 ORTHO05D013124 1.0e-06 57.8 174 32.2
Nn3g21159 Nelumbo nucifera HOM05D012218 ORTHO05D019306 3.9e-06 55.8 143 32.2
CAN.G1489.12 Capsicum annuum HOM05D010873 ORTHO05D013124 5.1e-06 55.5 129 34.1


User provided reference genes

Program Settings