Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018738 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.7e-38 162.2 78 100.0
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.4e-29 130.6 73 86.3
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 5.5e-26 120.6 67 85.1
CSS0048435 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.2e-26 120.2 67 83.6
CSS0006667 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.1e-25 118.6 67 83.6
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.4e-24 115.9 71 77.5
CSS0048922 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.3e-22 109.4 60 83.3
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.1e-21 104.8 73 64.4
CSS0030175 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.4e-21 104.0 59 81.4
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.0e-21 103.6 73 71.2
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.2e-17 92.8 73 63.0
CSS0042933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.4e-16 89.4 57 71.9
CSS0040739 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.1e-13 79.7 40 90.0
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.7e-12 75.1 40 87.5
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.7e-12 75.1 40 87.5
Hund19303 Selenicereus undatus HOM05D000665 ORTHO05D000140 1.0e-11 73.2 67 53.7
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.3e-11 72.8 40 85.0
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.3e-11 72.0 40 85.0
Hund00253 Selenicereus undatus HOM05D012237 ORTHO05D010947 5.0e-11 70.9 72 52.8
Hma1.2p1_0131F.1_g060610 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.9e-10 68.9 70 48.6
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.6e-09 64.7 71 46.5
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 1.2e-07 59.7 70 42.9
BraA10t43304Z Brassica rapa HOM05D001678 ORTHO05D001698 1.5e-07 59.3 67 41.8
CSS0023971 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.5e-07 59.3 33 81.8
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 3.4e-07 58.2 68 42.6
CSS0044283 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.8e-07 57.4 33 78.8
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.3e-06 56.2 75 40.0
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.3e-06 56.2 75 40.0
arahy.Tifrunner.gnm1.ann1.V1HUJD Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-06 55.8 73 38.4
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.7e-06 55.8 66 37.9
ECA240G3965 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-06 55.5 66 45.5
A03p43320 Brassica napus HOM05D001678 ORTHO05D001698 2.9e-06 55.1 67 40.3
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 3.7e-06 54.7 64 43.8
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 4.9e-06 54.3 65 44.6
ECA247G0616 Erigeron canadensis HOM05D000034 ORTHO05D000277 4.9e-06 54.3 65 44.6
BcaB01g02681 Brassica carinata HOM05D001678 ORTHO05D001698 8.3e-06 53.5 65 40.0
CSS0026146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 8.3e-06 53.5 26 92.3


User provided reference genes

Program Settings