Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 0.0e+00 1377.8 780 100.0
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.6e-253 879.8 796 70.9
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.5e-224 783.5 800 66.8
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 8.4e-207 724.5 879 58.1
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 2.7e-197 693.0 676 66.0
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 2.1e-194 683.3 777 59.5
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.1e-193 681.0 782 60.4
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 7.6e-192 674.9 777 59.7
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 3.8e-191 672.5 794 58.6
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 4.9e-191 672.2 775 59.9
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 4.2e-190 669.1 790 58.6
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 5.5e-190 668.7 730 61.5
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 9.3e-190 667.9 783 58.5
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.0e-188 664.5 783 58.2
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 2.4e-185 653.3 796 58.0
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 7.6e-184 648.3 890 53.3
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 2.5e-182 643.3 727 60.5
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 1.6e-181 640.6 793 57.0
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 6.7e-180 635.2 691 63.4
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.9e-179 633.6 732 59.0
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.6e-178 630.6 718 60.4
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.7e-178 629.4 701 60.9
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 3.8e-175 619.4 712 58.7
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 1.9e-171 607.1 708 58.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 2.8e-170 603.2 824 44.4
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 8.8e-164 581.6 703 57.3
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 3.3e-163 579.7 709 56.1
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 5.3e-161 572.4 769 52.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.2e-160 571.2 767 55.0
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 3.5e-160 569.7 780 53.2
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 2.5e-158 563.5 766 53.9
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 1.8e-156 557.4 745 55.4
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 7.4e-155 552.0 705 56.2
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.3e-154 551.2 656 50.9
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 4.8e-154 549.3 643 60.5
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 1.1e-153 548.1 724 53.7
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 2.6e-152 543.5 780 52.4
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 3.5e-152 543.1 768 52.6
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 4.5e-152 542.7 724 53.9
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 2.5e-150 537.0 641 51.2
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 3.2e-150 536.6 795 52.8
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 8.0e-149 531.9 793 51.7
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.4e-148 531.2 713 52.7
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.4e-148 531.2 670 55.2
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.4e-148 531.2 744 52.3
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 8.8e-148 528.5 637 59.2
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 8.8e-148 528.5 734 53.0
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 2.0e-144 517.3 784 51.8
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 2.0e-144 517.3 739 53.5
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 2.7e-144 516.9 745 53.2
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 6.5e-143 512.3 662 55.9
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 1.9e-142 510.8 718 52.2
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 4.2e-142 509.6 764 51.8
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 9.4e-142 508.4 633 57.8
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 2.1e-141 507.3 784 51.4
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 4.0e-140 503.1 657 57.1
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 1.5e-139 501.1 780 50.3
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.2e-138 497.3 786 47.8
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 8.3e-138 495.4 766 49.3
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 7.7e-136 488.8 723 51.0
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.8e-133 480.3 828 45.9
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 4.4e-131 473.0 707 51.3
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 2.2e-130 470.7 705 51.5
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 2.8e-130 470.3 702 52.1
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 1.3e-127 461.5 702 51.3
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 3.6e-125 453.4 713 49.9
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 6.1e-125 452.6 469 53.9
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 3.1e-124 450.3 719 49.1
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 1.1e-121 441.8 791 47.2
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.9e-121 441.0 615 43.1
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 2.4e-121 440.7 709 50.2
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 4.6e-120 436.4 788 46.7
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 1.0e-119 435.3 549 58.3
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.7e-119 434.5 708 49.6
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.5e-118 431.4 657 49.6
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 2.8e-117 427.2 642 51.1
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 1.4e-116 424.9 782 46.5
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 8.9e-116 422.2 214 99.1
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 2.2e-114 417.5 734 47.8
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 3.7e-114 416.8 711 48.5
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 8.6e-111 405.6 632 52.1
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 9.5e-110 402.1 572 54.7
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 2.8e-109 400.6 478 48.1
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.5e-107 394.8 574 52.4
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 5.1e-103 379.8 544 52.6
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 2.1e-93 347.8 461 61.2
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 1.8e-92 344.7 595 39.0
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 3.1e-92 344.0 575 48.5
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 4.3e-86 323.6 713 41.9
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 2.1e-85 321.2 709 41.7
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 6.4e-82 309.7 344 52.9
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 6.7e-79 299.7 235 64.7
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 1.9e-78 298.1 791 34.4
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.5e-78 297.7 176 90.3
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 2.5e-65 254.6 445 51.9
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 8.7e-63 246.1 258 54.3
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 3.4e-59 234.2 406 52.2
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 2.8e-53 214.5 507 32.3
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.3e-45 189.1 198 57.1
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.7e-42 178.7 463 31.5
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 3.0e-39 167.9 636 26.7
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 7.0e-36 156.8 399 33.3
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 2.9e-34 151.4 216 48.1
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 1.4e-23 115.9 133 48.9
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 9.1e-20 103.2 76 69.7
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.3e-18 98.6 47 95.7
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 2.5e-17 95.1 214 36.9
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.1e-16 92.0 158 39.2
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 1.0e-15 89.7 81 55.6
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 2.3e-15 88.6 75 64.0
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 2.3e-15 88.6 142 41.5
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 2.0e-14 85.5 111 47.7
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla HOM05D006757 ORTHO05D034208 2.0e-11 75.5 122 41.8
PSO210G3145 Papaver somniferum HOM05D001616 ORTHO05D004707 8.9e-07 60.1 249 22.9
PSO302G0169 Papaver somniferum HOM05D001616 ORTHO05D004707 8.9e-07 60.1 249 22.9
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.2e-06 59.7 249 26.9
COL.COLO4_19883 Corchorus olitorius HOM05D001616 ORTHO05D003701 1.2e-06 59.7 273 24.9
Haze_10728 Corylus avellana HOM05D063416 ORTHO05D034208 2.6e-06 58.5 108 38.9
Dinv40805 Davidia involucrata HOM05D001616 ORTHO05D004707 3.4e-06 58.2 125 32.0
Hund01947 Selenicereus undatus HOM05D001616 ORTHO05D004707 3.4e-06 58.2 231 24.2
CSS0046077 Camellia sinensis var. sinensis HOM05D031886 ORTHO05D113146 9.8e-06 56.6 26 100.0


User provided reference genes

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