Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018735 Camellia sinensis var. sinensis HOM05D009745 ORTHO05D011350 3.9e-88 328.2 172 100.0
Rhsim12G0042100 Rhododendron simsii HOM05D009745 ORTHO05D011350 1.4e-45 186.8 173 57.2
Actinidia37407 Actinidia chinensis HOM05D009745 ORTHO05D011350 1.9e-42 176.4 156 58.3
SGA_v2.0_scaffold63G21711 Striga asiatica HOM05D009745 ORTHO05D011350 6.3e-22 108.2 176 38.6
Dinv15255 Davidia involucrata HOM05D009745 ORTHO05D011350 5.3e-21 105.1 147 40.1
DCAR_023403 Daucus carota HOM05D009745 ORTHO05D011350 1.5e-20 103.6 172 37.8
DCAR_026529 Daucus carota HOM05D009745 ORTHO05D011350 1.4e-18 97.1 156 37.8
unitig_23.g29657 Utricularia gibba HOM05D009745 ORTHO05D011350 5.5e-18 95.1 166 36.1
unitig_25.g30577 Utricularia gibba HOM05D009745 ORTHO05D011350 5.5e-18 95.1 166 36.1
unitig_22.g6453 Utricularia gibba HOM05D009745 ORTHO05D011350 7.2e-18 94.7 173 35.8
Oeu012697.1 Olea europaea HOM05D009745 ORTHO05D011350 6.1e-17 91.7 175 33.1
DCAR_031127 Daucus carota HOM05D009745 ORTHO05D011350 3.9e-16 89.0 145 35.2
Dinv24814 Davidia involucrata HOM05D009745 ORTHO05D011350 1.1e-15 87.4 151 37.1
Migut.E00187 Erythranthe guttata HOM05D009745 ORTHO05D011350 1.3e-14 84.0 178 33.7
MSTRG.2411 Avicennia marina HOM05D009745 ORTHO05D011350 4.5e-12 75.5 165 33.3
Oeu038602.1 Olea europaea HOM05D009745 ORTHO05D011350 1.1e-10 70.9 165 30.3
Oeu059922.1 Olea europaea HOM05D009745 ORTHO05D011350 1.4e-10 70.5 212 27.8
Oeu059919.1 Olea europaea HOM05D019021 ORTHO05D011350 2.5e-10 69.7 140 33.6
Oeu038608.1 Olea europaea HOM05D009745 ORTHO05D011350 7.2e-10 68.2 142 31.7
TWI36G0098 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 7.2e-10 68.2 163 29.4
Lsat_1_v5_gn_3_65401 Lactuca sativa HOM05D009745 ORTHO05D011350 9.4e-10 67.8 145 31.7
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 4.7e-09 65.5 163 28.2
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 3.9e-08 62.4 164 28.0
TWI75G1444 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 3.9e-08 62.4 166 28.3
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 8.8e-08 61.2 156 24.4
Nitab4.5_0007682g0020 Nicotiana tabacum HOM05D009745 ORTHO05D011350 8.8e-08 61.2 123 26.8
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 1.1e-07 60.8 168 26.8
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 1.1e-07 60.8 168 26.8
MSTRG.2412 Avicennia marina HOM05D019021 ORTHO05D011350 1.1e-07 60.8 150 29.3
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 1.1e-07 60.8 148 27.0
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 1.1e-07 60.8 132 27.3
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 1.5e-07 60.5 136 27.2
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 2.0e-07 60.1 136 27.2
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 2.0e-07 60.1 169 26.6
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 2.0e-07 60.1 136 27.2
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 2.0e-07 60.1 169 26.6
CAN.G447.11 Capsicum annuum HOM05D009745 ORTHO05D011350 3.3e-07 59.3 153 26.1
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 3.3e-07 59.3 160 26.9
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 4.4e-07 58.9 175 26.3
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 5.7e-07 58.5 136 25.7
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 5.7e-07 58.5 159 25.8
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 5.7e-07 58.5 162 25.9
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 7.4e-07 58.2 169 26.0
Migut.L01474 Erythranthe guttata HOM05D019021 ORTHO05D011350 7.4e-07 58.2 146 28.8
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 9.7e-07 57.8 136 25.0
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 1.3e-06 57.4 136 27.2
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 1.3e-06 57.4 159 24.5
SalBow2G3513 Salvia bowleyana HOM05D019021 ORTHO05D011350 1.3e-06 57.4 134 29.1
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 1.7e-06 57.0 136 27.2
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 1.7e-06 57.0 175 26.3
MELO3C011973.2 Cucumis melo HOM05D008070 ORTHO05D001888 1.7e-06 57.0 173 26.0
Nitab4.5_0002255g0030 Nicotiana tabacum HOM05D009745 ORTHO05D011350 1.7e-06 57.0 116 25.0
Actinidia18454 Actinidia chinensis HOM05D005742 ORTHO05D001888 2.2e-06 56.6 144 28.5
Actinidia40376 Actinidia chinensis HOM05D005742 ORTHO05D001888 2.2e-06 56.6 144 28.5
Peaxi162Scf00623g00056 Petunia axillaris HOM05D016063 ORTHO05D017753 2.2e-06 56.6 145 30.3
BraA02t06717Z Brassica rapa HOM05D008070 ORTHO05D001888 4.8e-06 55.5 160 24.4
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 6.3e-06 55.1 159 25.2
A02p16620 Brassica napus HOM05D008070 ORTHO05D001888 8.2e-06 54.7 160 24.4


User provided reference genes

Program Settings