Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.2e-62 243.0 122 100.0
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 4.0e-47 191.4 120 78.3
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 2.0e-46 189.1 118 78.8
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 4.9e-45 184.5 118 77.1
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.1e-44 183.3 118 76.3
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 1.4e-44 183.0 117 76.9
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 7.1e-44 180.6 115 73.0
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 2.7e-43 178.7 117 71.8
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 3.0e-42 175.3 119 69.7
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 3.9e-42 174.9 117 70.1
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 6.6e-42 174.1 115 71.3
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 1.5e-41 172.9 116 68.1
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.5e-41 172.9 115 71.3
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.9e-41 172.6 114 71.9
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.9e-41 172.6 113 74.3
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 2.5e-41 172.2 117 68.4
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 9.5e-41 170.2 113 70.8
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.2e-40 169.9 115 71.3
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 1.2e-40 169.9 115 69.6
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.2e-40 169.9 120 69.2
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 1.6e-40 169.5 116 69.0
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.1e-40 169.1 114 71.1
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 2.1e-40 169.1 116 69.0
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 2.8e-40 168.7 115 69.6
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 2.8e-40 168.7 111 70.3
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 4.7e-40 167.9 120 69.2
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 6.2e-40 167.5 115 68.7
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 6.2e-40 167.5 116 69.0
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 6.2e-40 167.5 119 66.4
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 6.2e-40 167.5 115 72.2
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 1.4e-39 166.4 116 68.1
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.4e-39 166.4 115 71.3
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.4e-39 166.4 115 69.6
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 1.4e-39 166.4 117 65.8
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.8e-39 166.0 116 67.2
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.8e-39 166.0 120 62.5
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.8e-39 166.0 115 68.7
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.8e-39 166.0 115 68.7
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.3e-39 165.6 115 69.6
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 3.1e-39 165.2 116 68.1
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 4.0e-39 164.9 123 65.9
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 5.2e-39 164.5 114 67.5
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 5.2e-39 164.5 115 70.4
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 6.8e-39 164.1 115 68.7
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 6.8e-39 164.1 115 67.0
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 8.9e-39 163.7 115 67.8
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 1.2e-38 163.3 121 65.3
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 1.2e-38 163.3 114 66.7
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.5e-38 162.9 112 66.1
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.5e-38 162.9 115 67.8
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 2.0e-38 162.5 118 66.9
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 2.0e-38 162.5 115 66.1
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 2.6e-38 162.2 123 64.2
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 2.6e-38 162.2 115 69.6
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 3.4e-38 161.8 113 68.1
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 3.4e-38 161.8 120 66.7
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 4.4e-38 161.4 115 65.2
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 4.4e-38 161.4 108 71.3
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 4.4e-38 161.4 115 67.8
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 5.8e-38 161.0 115 67.0
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 5.8e-38 161.0 110 68.2
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.8e-38 161.0 112 65.2
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 7.6e-38 160.6 117 67.5
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 7.6e-38 160.6 114 67.5
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 1.3e-37 159.8 112 64.3
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 1.7e-37 159.5 110 68.2
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 1.7e-37 159.5 110 68.2
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 1.7e-37 159.5 116 63.8
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.9e-37 158.7 116 66.4
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 3.7e-37 158.3 110 67.3
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 4.9e-37 157.9 108 70.4
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 6.4e-37 157.5 110 67.3
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 6.4e-37 157.5 110 67.3
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.4e-37 157.5 112 63.4
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 8.3e-37 157.1 110 66.4
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 1.1e-36 156.8 116 63.8
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.1e-36 156.8 115 66.1
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 5.4e-36 154.5 110 68.2
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 5.4e-36 154.5 120 62.5
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 5.4e-36 154.5 115 61.7
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 5.4e-36 154.5 115 60.9
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 9.2e-36 153.7 115 61.7
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.2e-35 153.3 113 64.6
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.6e-35 152.9 119 64.7
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 2.7e-35 152.1 112 67.0
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 2.7e-35 152.1 115 60.0
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 3.5e-35 151.8 105 69.5
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 3.5e-35 151.8 105 69.5
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 3.5e-35 151.8 105 69.5
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.0e-34 150.2 116 62.1
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 2.3e-34 149.1 104 68.3
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 2.3e-34 149.1 104 68.3
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.0e-34 148.7 111 60.4
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 6.6e-34 147.5 159 49.7
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.1e-33 146.7 116 64.7
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 3.3e-33 145.2 109 66.1
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 7.3e-33 144.1 110 59.1
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 9.6e-33 143.7 113 59.3
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.4e-31 139.8 108 57.4
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 3.1e-31 138.7 117 57.3
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 4.0e-31 138.3 120 58.3
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.2e-31 137.9 98 64.3
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 2.6e-30 135.6 98 65.3
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 6.4e-29 131.0 120 55.8
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 3.0e-26 122.1 113 55.8
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 4.0e-23 111.7 113 47.8
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.3e-21 106.7 108 49.1
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 4.9e-21 104.8 67 71.6
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.9e-20 102.8 118 50.8
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 1.9e-20 102.8 113 45.1
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 2.4e-20 102.4 111 51.4
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 9.3e-20 100.5 78 56.4
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.6e-19 99.8 95 61.1
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.1e-19 99.4 78 60.3
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 7.9e-19 97.4 65 72.3
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 8.7e-18 94.0 82 53.7
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 8.1e-16 87.4 63 65.1
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 1.3e-13 80.1 108 38.9
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 1.6e-11 73.2 108 38.0
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 3.0e-10 68.9 38 86.8
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 1.5e-09 66.6 42 71.4
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 4.3e-09 65.1 106 35.8
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 5.6e-09 64.7 43 72.1
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 9.0e-07 57.4 39 66.7


User provided reference genes

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