Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018723 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 1.0e-58 230.7 213 100.0
CSS0009451 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 6.5e-53 211.5 140 95.0
CSS0020656 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 2.7e-46 189.5 140 77.9
Rhsim03G0013500 Rhododendron simsii HOM05D003506 ORTHO05D004063 4.9e-32 142.1 144 63.9
Rhsim03G0013200 Rhododendron simsii HOM05D003506 ORTHO05D004063 1.4e-31 140.6 144 63.2
Actinidia26982 Actinidia chinensis HOM05D003506 ORTHO05D004063 4.1e-31 139.0 145 69.0
Rhsim03G0013700 Rhododendron simsii HOM05D003506 ORTHO05D004063 1.1e-28 131.0 144 61.1
Rhsim03G0012900 Rhododendron simsii HOM05D003506 ORTHO05D004063 9.5e-28 127.9 144 60.4
Rhsim03G0054300 Rhododendron simsii HOM05D003506 ORTHO05D004063 2.1e-27 126.7 120 60.0
CSS0045089 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 8.0e-27 124.8 68 89.7
Actinidia11819 Actinidia chinensis HOM05D003506 ORTHO05D004063 9.8e-25 117.9 116 55.2
CSS0044487 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 2.9e-24 116.3 141 45.4
CSS0021977 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 1.6e-22 110.5 117 62.4
Cc08_g04830 Coffea canephora HOM05D003506 ORTHO05D004063 5.0e-21 105.5 118 50.8
Cc10_g11570 Coffea canephora HOM05D003506 ORTHO05D004063 6.6e-21 105.1 118 50.0
Cc00_g33500 Coffea canephora HOM05D003506 ORTHO05D004063 2.5e-20 103.2 101 53.5
Hma1.2p1_2475F.1_g322790 Hydrangea macrophylla HOM05D003506 ORTHO05D004063 2.3e-18 96.7 144 57.6
Cc00_g22760 Coffea canephora HOM05D003506 ORTHO05D004063 1.2e-17 94.4 113 49.6
CSS0001701 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 2.0e-17 93.6 201 42.8
RhsimUnG0207500 Rhododendron simsii HOM05D003506 ORTHO05D004063 5.8e-17 92.0 118 61.9
Lj1A1215T59 Lonicera japonica HOM05D003506 ORTHO05D004063 2.2e-16 90.1 116 43.1
Prupe.7G078000 Prunus persica HOM05D003506 ORTHO05D004063 3.2e-15 86.3 110 48.2
Prupe.7G078200 Prunus persica HOM05D003506 ORTHO05D004063 3.2e-15 86.3 110 48.2
Cc05_g09100 Coffea canephora HOM05D003506 ORTHO05D004063 9.2e-15 84.7 118 44.9
TWI60G1006 Tripterygium wilfordii HOM05D003506 ORTHO05D004063 2.7e-14 83.2 140 38.6
FvH4_6g22120 Fragaria vesca HOM05D003506 ORTHO05D004063 4.6e-14 82.4 116 42.2
FAN14G0755 Fragaria x ananassa HOM05D003506 ORTHO05D004063 4.6e-14 82.4 116 42.2
Atru.chr2.1012 Acer truncatum HOM05D003506 ORTHO05D004063 1.7e-13 80.5 115 42.6
Cc08_g04930 Coffea canephora HOM05D003506 ORTHO05D004063 3.9e-13 79.3 74 59.5
MD14G1055300 Malus domestica HOM05D003506 ORTHO05D004063 3.9e-13 79.3 99 44.4
Lsat_1_v5_gn_1_124100 Lactuca sativa HOM05D003506 ORTHO05D004063 5.0e-13 79.0 108 44.4
Lj2C372T7 Lonicera japonica HOM05D003506 ORTHO05D004063 8.6e-13 78.2 118 40.7
DCAR_013527 Daucus carota HOM05D003506 ORTHO05D004063 2.5e-12 76.6 135 40.7
Cpa.g.c37786 Carica papaya HOM05D003506 ORTHO05D004063 4.3e-12 75.9 117 41.9
Cpa.g.sc47.17 Carica papaya HOM05D003506 ORTHO05D004063 5.6e-12 75.5 108 40.7
Cpa.g.sc727.3 Carica papaya HOM05D003506 ORTHO05D004063 7.3e-12 75.1 117 42.7
DCAR_009112 Daucus carota HOM05D003506 ORTHO05D004063 2.1e-11 73.6 112 38.4
Cpa.g.sc27.145 Carica papaya HOM05D003506 ORTHO05D004063 6.2e-11 72.0 117 41.9
Cpa.g.sc27.151 Carica papaya HOM05D003506 ORTHO05D004063 6.2e-11 72.0 117 40.2
ECA248G2101 Erigeron canadensis HOM05D003506 ORTHO05D004063 8.1e-11 71.6 104 43.3
PGR042G2042 Punica granatum HOM05D003506 ORTHO05D004063 8.1e-11 71.6 117 42.7
MELO3C005504.2 Cucumis melo HOM05D003506 ORTHO05D004063 1.4e-10 70.9 118 38.1
QL12p010090 Quercus lobata HOM05D003506 ORTHO05D004063 1.4e-10 70.9 112 40.2
Haze_19427 Corylus avellana HOM05D003506 ORTHO05D004063 1.8e-10 70.5 114 43.0
CsaV3_5G004570 Cucumis sativus L. HOM05D003506 ORTHO05D004063 2.3e-10 70.1 118 38.1
Sed0023391 Sechium edule HOM05D003506 ORTHO05D004063 3.1e-10 69.7 103 41.7
Thecc.03G312300 Theobroma cacao HOM05D003506 ORTHO05D004063 3.1e-10 69.7 72 55.6
Dinv40460 Davidia involucrata HOM05D003506 ORTHO05D004063 4.0e-10 69.3 126 40.5
Cpa.g.sc27.143 Carica papaya HOM05D003506 ORTHO05D004063 5.2e-10 68.9 117 40.2
Cpa.g.sc27.148 Carica papaya HOM05D003506 ORTHO05D004063 5.2e-10 68.9 117 38.5
CAN.G641.75 Capsicum annuum HOM05D003506 ORTHO05D004063 6.8e-10 68.6 95 41.1
Cpa.g.sc27.154 Carica papaya HOM05D003506 ORTHO05D004063 6.8e-10 68.6 117 40.2
Haze_19428 Corylus avellana HOM05D003506 ORTHO05D004063 6.8e-10 68.6 116 42.2
QL12p009920 Quercus lobata HOM05D003506 ORTHO05D004063 6.8e-10 68.6 113 39.8
Aqoxy1G04209 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 8.9e-10 68.2 125 40.0
CAN.G641.64 Capsicum annuum HOM05D003506 ORTHO05D004063 1.5e-09 67.4 95 40.0
Potri.003G101000 Populus trichocarpa HOM05D003506 ORTHO05D004063 1.5e-09 67.4 116 36.2
CANSAT21G2366 Cannabis sativa HOM05D003506 ORTHO05D004063 2.0e-09 67.0 117 35.9
Aqoxy4G00434 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 2.6e-09 66.6 120 44.2
CiPaw.11G083500 Carya illinoinensis HOM05D003506 ORTHO05D004063 2.6e-09 66.6 94 43.6
MBI18_g46344_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 2.6e-09 66.6 94 41.5
THA.LOC104806185 Tarenaya hassleriana HOM05D003506 ORTHO05D004063 2.6e-09 66.6 99 39.4
QL12p010199 Quercus lobata HOM05D003506 ORTHO05D004063 3.4e-09 66.2 113 38.9
MBI18_g07919_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 4.4e-09 65.9 94 41.5
Cfa001535 Carpinus fangiana HOM05D003506 ORTHO05D004063 5.8e-09 65.5 115 42.6
CANSAT56G2852 Cannabis sativa HOM05D003506 ORTHO05D004063 9.8e-09 64.7 113 33.6
Aqoxy4G00435 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 1.3e-08 64.3 120 42.5
Eucgr.E00383 Eucalyptus grandis HOM05D003506 ORTHO05D004063 1.3e-08 64.3 95 43.2
QL12p010549 Quercus lobata HOM05D003506 ORTHO05D004063 1.3e-08 64.3 100 50.0
Cpa.g.c48019 Carica papaya HOM05D003506 ORTHO05D004063 1.7e-08 63.9 117 36.8
Nn1g03848 Nelumbo nucifera HOM05D003506 ORTHO05D004063 1.7e-08 63.9 67 52.2
Aqoxy1G04135 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 3.7e-08 62.8 139 36.0
Cfa001536 Carpinus fangiana HOM05D003506 ORTHO05D004063 3.7e-08 62.8 87 43.7
Lsat_1_v5_gn_1_123181 Lactuca sativa HOM05D003506 ORTHO05D004063 3.7e-08 62.8 65 53.8
QL12p009886 Quercus lobata HOM05D003506 ORTHO05D004063 3.7e-08 62.8 100 49.0
MBI18_g33707_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 8.3e-08 61.6 97 40.2
Aqoxy1G02153 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 1.4e-07 60.8 111 42.3
Gohir.A08G152600 Gossypium hirsutum HOM05D003506 ORTHO05D004063 1.9e-07 60.5 64 51.6
Gohir.D08G173500 Gossypium hirsutum HOM05D003506 ORTHO05D004063 2.4e-07 60.1 64 51.6
Gorai.004G181200 Gossypium raimondii HOM05D003506 ORTHO05D004063 2.4e-07 60.1 64 51.6
Ciclev10033967m.g Citrus clementina HOM05D003506 ORTHO05D004063 3.2e-07 59.7 120 33.3
Duzib205G1851 Durio zibethinus HOM05D003506 ORTHO05D004063 4.1e-07 59.3 55 52.7
Thhalv10024259m.g Eutrema salsugineum HOM05D003506 ORTHO05D004063 4.1e-07 59.3 121 35.5
MBI18_g30582_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 4.1e-07 59.3 94 39.4
Aa31LG9G7510 Aethionema arabicum HOM05D003506 ORTHO05D004063 5.4e-07 58.9 99 39.4
Aqoxy2G00596 Aquilegia oxysepala HOM05D008432 ORTHO05D010288 7.1e-07 58.5 118 43.2
COL.COLO4_16912 Corchorus olitorius HOM05D003506 ORTHO05D004063 7.1e-07 58.5 72 47.2
MBI18_g07920_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 7.1e-07 58.5 94 39.4
ClCG00G003230 Citrullus lanatus HOM05D003506 ORTHO05D004063 9.2e-07 58.2 76 43.4
ClCG01G004380 Citrullus lanatus HOM05D003506 ORTHO05D004063 9.2e-07 58.2 76 43.4
MBI18_g30506_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 1.2e-06 57.8 94 39.4
Sp7g17770 Schrenkiella parvula HOM05D003506 ORTHO05D004063 1.2e-06 57.8 122 35.2
HanXRQChr01g0003761 Helianthus annuus HOM05D003506 ORTHO05D004063 1.6e-06 57.4 93 36.6
PGR042G2755 Punica granatum HOM05D003506 ORTHO05D004063 2.1e-06 57.0 121 30.6
MBI15_g15093_MAGBIO Magnolia biondii HOM05D003506 ORTHO05D010288 2.7e-06 56.6 107 38.3
THA.LOC104798470 Tarenaya hassleriana HOM05D002287 ORTHO05D004063 2.7e-06 56.6 118 37.3
MBI18_g24132_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 3.5e-06 56.2 117 34.2
Eucgr.G01441 Eucalyptus grandis HOM05D003506 ORTHO05D004063 4.6e-06 55.8 126 31.7
MBI05_g05724_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 4.6e-06 55.8 94 38.3
Eucgr.D00770 Eucalyptus grandis HOM05D003506 ORTHO05D004063 7.8e-06 55.1 133 31.6
Eucgr.H05031 Eucalyptus grandis HOM05D000046 ORTHO05D002559 7.8e-06 55.1 117 34.2


User provided reference genes

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