Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.5e-58 228.0 110 100.0
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.5e-58 228.0 110 100.0
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.7e-49 199.1 114 87.7
CSS0029053 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D113416 8.9e-22 107.1 108 50.9
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 1.4e-14 83.2 67 62.7
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 2.4e-14 82.4 49 73.5
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 2.4e-14 82.4 49 73.5
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 2.0e-13 79.3 46 76.1
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 2.0e-13 79.3 49 71.4
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 3.4e-13 78.6 49 69.4
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 3.4e-13 78.6 49 69.4
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 4.4e-13 78.2 77 53.2
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 4.4e-13 78.2 54 64.8
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 4.4e-13 78.2 74 54.1
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 5.8e-13 77.8 49 71.4
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 5.8e-13 77.8 46 73.9
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 5.8e-13 77.8 44 72.7
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 5.8e-13 77.8 49 69.4
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 7.6e-13 77.4 46 73.9
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 9.9e-13 77.0 44 72.7
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 9.9e-13 77.0 49 69.4
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 9.9e-13 77.0 54 63.0
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 1.3e-12 76.6 49 69.4
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 1.7e-12 76.3 46 73.9
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.7e-12 76.3 49 65.3
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 1.7e-12 76.3 49 65.3
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 2.2e-12 75.9 49 67.3
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 2.2e-12 75.9 46 69.6
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 2.9e-12 75.5 54 61.1
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 2.9e-12 75.5 43 74.4
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 3.8e-12 75.1 41 80.5
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 3.8e-12 75.1 47 72.3
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 4.9e-12 74.7 81 53.1
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 6.4e-12 74.3 54 59.3
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 6.4e-12 74.3 46 67.4
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 6.4e-12 74.3 58 58.6
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 6.4e-12 74.3 58 58.6
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 6.4e-12 74.3 46 67.4
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 6.4e-12 74.3 82 48.8
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 8.4e-12 73.9 54 59.3
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 8.4e-12 73.9 46 67.4
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 8.4e-12 73.9 49 65.3
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 1.1e-11 73.6 44 70.5
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 1.1e-11 73.6 54 59.3
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 1.1e-11 73.6 44 72.7
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 1.1e-11 73.6 44 75.0
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 1.4e-11 73.2 49 63.3
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 1.4e-11 73.2 97 43.3
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 1.4e-11 73.2 49 65.3
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 1.4e-11 73.2 62 54.8
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 1.4e-11 73.2 49 65.3
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 1.9e-11 72.8 49 63.3
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 1.9e-11 72.8 49 63.3
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 1.9e-11 72.8 46 69.6
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 1.9e-11 72.8 49 65.3
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 1.9e-11 72.8 43 74.4
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 1.9e-11 72.8 49 65.3
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 1.9e-11 72.8 60 55.0
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 2.4e-11 72.4 46 71.7
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 2.4e-11 72.4 45 73.3
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 2.4e-11 72.4 45 73.3
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 2.4e-11 72.4 45 73.3
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 2.4e-11 72.4 46 65.2
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 3.2e-11 72.0 46 67.4
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 3.2e-11 72.0 46 67.4
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 3.2e-11 72.0 46 67.4
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 3.2e-11 72.0 42 76.2
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 3.2e-11 72.0 44 72.7
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 3.2e-11 72.0 49 63.3
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 4.2e-11 71.6 46 65.2
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 4.2e-11 71.6 46 65.2
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 5.4e-11 71.2 43 72.1
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 5.4e-11 71.2 46 63.0
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 5.4e-11 71.2 43 72.1
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 7.1e-11 70.9 43 69.8
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 1.6e-10 69.7 46 63.0
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 1.6e-10 69.7 95 41.1
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 2.1e-10 69.3 54 55.6
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 4.6e-10 68.2 45 66.7
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 4.6e-10 68.2 46 60.9
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 6.0e-10 67.8 44 65.9
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 6.0e-10 67.8 95 41.1
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 6.0e-10 67.8 66 53.0
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 7.8e-10 67.4 43 72.1
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 1.0e-09 67.0 44 68.2
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 1.3e-09 66.6 45 64.4
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 1.3e-09 66.6 44 61.4
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 3.9e-09 65.1 44 63.6
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 1.5e-08 63.2 43 62.8
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 1.5e-08 63.2 44 56.8
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 3.3e-08 62.0 49 55.1
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 3.3e-08 62.0 62 53.2
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 4.3e-08 61.6 46 56.5
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 1.8e-06 56.2 44 52.3
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 3.1e-06 55.5 33 66.7


User provided reference genes

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