Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.8e-148 528.1 259 100.0
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.8e-148 528.1 259 100.0
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 4.7e-122 441.4 250 88.0
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 6.8e-121 437.6 255 85.1
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.6e-120 435.6 250 86.8
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 1.1e-115 420.2 256 84.8
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 8.3e-111 404.1 257 77.4
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 1.9e-110 402.9 257 79.8
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 3.0e-108 395.6 257 76.3
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 4.3e-107 391.7 254 76.8
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 5.6e-107 391.3 255 75.7
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 5.6e-107 391.3 257 75.5
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 2.1e-106 389.4 257 75.1
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.8e-106 389.0 253 75.9
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 6.2e-106 387.9 254 76.0
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 5.8e-104 381.3 251 76.9
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.3e-103 380.2 255 74.1
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 1.7e-103 379.8 254 74.8
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 2.2e-103 379.4 257 72.8
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 6.4e-103 377.9 240 78.3
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 6.4e-103 377.9 244 77.5
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 1.9e-102 376.3 253 75.1
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 3.2e-102 375.6 259 73.0
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 3.2e-102 375.6 256 71.5
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 1.6e-101 373.2 256 71.1
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 1.6e-101 373.2 262 72.5
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 2.7e-101 372.5 257 74.3
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 2.7e-101 372.5 251 73.3
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 3.5e-101 372.1 258 74.0
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 7.8e-101 370.9 257 73.5
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 1.0e-100 370.5 255 73.7
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 2.3e-100 369.4 247 75.7
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 6.6e-100 367.9 254 73.6
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 1.1e-99 367.1 250 72.8
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 1.5e-99 366.7 258 70.2
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 2.5e-99 365.9 251 72.5
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 2.5e-99 365.9 327 64.2
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 3.3e-99 365.5 258 69.0
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 4.3e-99 365.2 250 72.0
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 9.5e-99 364.0 240 76.2
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 2.8e-98 362.5 259 69.5
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.4e-97 360.1 256 71.9
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 1.8e-97 359.8 250 73.2
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 3.1e-97 359.0 256 71.5
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 5.2e-97 358.2 242 72.7
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 5.2e-97 358.2 255 69.4
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 6.8e-97 357.8 261 69.3
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 8.9e-97 357.5 255 71.0
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.5e-96 356.7 256 71.5
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 2.6e-96 355.9 254 70.9
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 2.6e-96 355.9 257 70.0
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 3.4e-96 355.5 252 71.0
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 2.2e-95 352.8 258 70.2
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 2.2e-95 352.8 237 73.8
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 4.9e-95 351.7 290 64.5
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 1.4e-94 350.1 253 70.4
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 2.4e-94 349.4 250 68.8
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 2.4e-94 349.4 254 68.1
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 2.4e-94 349.4 197 86.8
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 1.2e-93 347.1 251 66.9
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 6.0e-93 344.7 259 68.3
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 6.0e-93 344.7 259 68.3
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 6.0e-93 344.7 256 66.8
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 1.3e-92 343.6 249 68.7
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 3.9e-92 342.0 249 68.7
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 6.6e-92 341.3 254 65.7
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 1.1e-91 340.5 254 67.7
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 2.5e-91 339.3 254 67.3
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 2.5e-91 339.3 258 65.1
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 1.6e-90 336.7 259 65.3
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 1.1e-89 334.0 252 65.9
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 2.4e-89 332.8 254 66.1
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 5.3e-89 331.6 252 65.9
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 9.0e-89 330.9 259 63.7
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 1.2e-88 330.5 252 65.9
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 2.0e-88 329.7 259 63.3
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 1.7e-87 326.6 259 62.9
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 2.2e-87 326.2 247 66.4
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 2.2e-87 326.2 241 66.4
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 2.9e-87 325.9 259 62.5
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 2.9e-87 325.9 259 62.5
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 4.9e-87 325.1 259 62.2
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 4.9e-87 325.1 257 66.5
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 8.4e-87 324.3 252 64.7
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 8.4e-87 324.3 209 80.9
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 1.4e-86 323.6 252 63.9
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 1.4e-86 323.6 252 63.9
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 1.4e-86 323.6 239 68.6
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 3.2e-86 322.4 259 61.8
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 3.2e-86 322.4 252 63.5
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 3.2e-86 322.4 259 61.8
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 3.2e-86 322.4 252 63.9
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 4.2e-86 322.0 252 63.9
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 2.7e-85 319.3 257 65.8
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 1.7e-84 316.6 256 65.2
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 8.7e-84 314.3 242 64.0
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 1.6e-82 310.1 242 64.9
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 2.1e-82 309.7 242 65.3
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 4.8e-82 308.5 241 63.5
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 2.4e-81 306.2 196 78.1
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 6.9e-81 304.7 221 68.3
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 3.4e-80 302.4 253 62.5
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 1.1e-75 287.3 250 62.8
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 6.9e-73 278.1 253 59.3
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.5e-72 275.4 250 61.2
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 9.9e-72 274.2 250 61.2
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 9.9e-72 274.2 250 60.8
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 3.8e-71 272.3 240 56.2
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 8.4e-71 271.2 197 70.6
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 7.1e-70 268.1 243 60.9
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 4.3e-67 258.8 246 52.0
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 2.1e-66 256.5 163 77.9
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 2.0e-64 250.0 236 52.1
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 3.2e-62 242.7 192 67.2
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.9e-60 235.7 140 82.9
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 7.7e-56 221.5 237 50.2
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.1e-54 217.6 186 56.5
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 3.2e-54 216.1 137 78.1
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 5.1e-52 208.8 232 44.0
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 2.6e-48 196.4 141 68.8
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 1.4e-41 174.1 137 63.5
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 4.4e-35 152.5 209 38.3
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 7.2e-30 135.2 221 35.7
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 3.7e-26 122.9 87 71.3
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 7.0e-25 118.6 82 68.3
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 2.0e-24 117.1 79 72.2
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 2.5e-22 110.2 79 67.1
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 2.5e-22 110.2 79 67.1
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 3.3e-14 83.2 58 62.1
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 3.6e-13 79.7 69 60.9
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 1.3e-07 61.2 47 57.4
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 2.9e-07 60.1 46 56.5
Pp3c15_21980 Physcomitrium patens HOM05D002209 ORTHO05D312687 7.3e-06 55.5 38 65.8


User provided reference genes

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