Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018695 Camellia sinensis var. sinensis HOM05D039489 ORTHO05D005220 8.1e-32 139.8 72 100.0
CSS0007257 Camellia sinensis var. sinensis HOM05D039489 ORTHO05D005220 1.0e-29 132.9 72 97.2
CSS0005932 Camellia sinensis var. sinensis HOM05D039489 ORTHO05D005220 2.5e-28 128.3 72 95.8
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.7e-13 79.0 46 87.0
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 3.2e-12 74.7 44 86.4
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 1.3e-08 62.8 50 66.0
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 4.8e-08 60.8 50 64.0
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 4.8e-08 60.8 50 68.0
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 1.2e-06 56.2 50 60.0
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 1.2e-06 56.2 50 60.0
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 3.4e-06 54.7 55 54.5
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 4.5e-06 54.3 55 50.9


User provided reference genes

Program Settings