Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 3.0e-200 701.8 340 100.0
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 3.0e-200 701.8 340 100.0
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 7.7e-172 607.4 336 85.7
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 2.9e-171 605.5 341 83.3
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 2.8e-166 589.0 334 84.7
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 4.1e-149 531.9 337 76.0
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 5.9e-148 528.1 336 75.6
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 5.9e-148 528.1 332 76.8
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.5e-146 523.5 330 76.4
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 1.9e-146 523.1 333 75.1
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 1.2e-145 520.4 332 75.3
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 6.1e-145 518.1 334 74.3
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 8.0e-145 517.7 332 74.4
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 8.0e-145 517.7 330 75.5
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 4.0e-144 515.4 330 75.8
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 5.2e-144 515.0 334 74.0
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 6.8e-144 514.6 335 73.7
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 4.4e-143 511.9 325 74.8
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 9.8e-143 510.8 333 73.6
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 2.2e-142 509.6 325 74.5
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 2.8e-142 509.2 331 73.1
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 2.8e-142 509.2 328 74.1
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 3.7e-142 508.8 326 74.5
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 4.8e-142 508.4 324 73.1
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 1.1e-141 507.3 328 74.7
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.1e-141 507.3 329 74.2
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 1.4e-141 506.9 333 73.0
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 2.4e-141 506.1 337 73.9
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 3.1e-141 505.8 336 73.8
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 3.1e-141 505.8 326 74.2
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 3.1e-141 505.8 332 73.2
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 7.0e-141 504.6 334 72.2
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.2e-140 503.8 326 74.5
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 1.2e-140 503.8 332 71.1
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.6e-140 503.4 326 73.9
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 1.6e-140 503.4 344 72.4
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.0e-140 503.1 332 72.3
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 2.0e-140 503.1 328 74.4
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 2.7e-140 502.7 330 73.3
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 3.5e-140 502.3 330 73.6
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 1.0e-139 500.7 330 73.9
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.7e-139 500.0 333 71.8
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 6.5e-139 498.0 330 72.4
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 8.5e-139 497.7 325 73.5
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 1.5e-138 496.9 333 72.4
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 5.5e-138 495.0 322 73.3
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 7.2e-138 494.6 327 71.6
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.6e-137 493.4 313 74.8
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 6.1e-137 491.5 324 72.2
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 1.4e-136 490.3 333 72.1
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 1.4e-136 490.3 332 70.5
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 2.3e-136 489.6 325 72.0
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 3.0e-136 489.2 337 73.0
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.0e-136 489.2 356 67.7
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 5.2e-136 488.4 324 72.5
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 1.2e-135 487.3 325 73.5
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 2.0e-135 486.5 336 71.4
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 2.6e-135 486.1 325 72.0
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 3.4e-135 485.7 335 69.3
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 4.4e-135 485.3 325 72.0
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 4.4e-135 485.3 339 70.2
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.3e-134 483.8 334 70.1
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.7e-134 483.4 332 69.3
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 6.3e-134 481.5 363 66.9
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.8e-133 479.9 331 68.9
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 2.4e-133 479.6 334 69.2
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 2.4e-133 479.6 314 72.3
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 4.1e-133 478.8 333 69.7
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 7.0e-133 478.0 324 68.2
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.6e-132 476.9 334 70.4
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 2.0e-132 476.5 327 68.5
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 3.5e-132 475.7 335 70.1
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 5.9e-132 474.9 327 71.9
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 7.7e-132 474.6 336 68.8
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 1.3e-131 473.8 307 74.3
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 8.6e-131 471.1 334 66.8
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 4.3e-130 468.8 329 66.9
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 5.6e-130 468.4 326 65.6
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 7.3e-130 468.0 335 67.5
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 9.5e-130 467.6 331 68.9
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 2.8e-129 466.1 330 65.8
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 3.6e-129 465.7 332 66.3
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 1.0e-128 464.2 328 70.7
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 4.0e-128 462.2 341 64.8
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 4.0e-128 462.2 341 64.8
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 5.2e-128 461.8 336 65.8
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 5.2e-128 461.8 336 65.8
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 1.2e-127 460.7 341 64.5
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 1.7e-126 456.8 333 66.7
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 1.7e-126 456.8 333 66.4
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 7.8e-124 448.0 437 54.9
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.3e-123 447.2 340 64.7
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 5.0e-123 445.3 333 66.7
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 5.6e-122 441.8 322 68.0
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 1.0e-120 437.6 325 64.9
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 5.2e-120 435.3 298 68.1
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 1.7e-118 430.3 287 70.4
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 2.2e-118 429.9 331 62.8
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 4.1e-109 399.1 348 58.3
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 5.1e-107 392.1 275 71.6
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 4.3e-106 389.0 309 62.1
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 4.6e-100 369.0 250 70.0
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 1.8e-96 357.1 328 53.4
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 3.1e-96 356.3 342 51.5
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.9e-93 347.1 228 74.1
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 9.9e-87 324.7 315 50.8
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.3e-86 324.3 315 51.1
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.2e-39 168.3 99 75.8
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 3.2e-37 160.2 333 35.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 1.6e-36 157.9 94 75.5
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 3.0e-27 127.1 133 54.1
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.2e-23 115.2 65 76.9
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 5.0e-22 109.8 77 64.9
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.0e-18 97.8 49 91.8
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 5.4e-16 89.7 66 68.2
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 7.0e-16 89.4 272 27.9
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 5.0e-14 83.2 53 71.7
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 9.8e-10 68.9 128 34.4


User provided reference genes

Program Settings