Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018666 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 4.8e-64 247.7 125 100.0
CSS0039818 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.4e-34 149.8 129 64.3
CSS0039790 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.7e-21 106.3 192 39.6
CSS0046737 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 5.0e-21 104.8 153 43.1
CSS0030070 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.9e-20 102.8 172 41.3
CSS0003799 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 4.7e-19 98.2 148 42.6
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-18 95.9 64 67.2
CSS0026513 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.3e-18 95.9 146 43.2
CSS0039991 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.9e-15 86.3 60 65.0
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-15 84.7 55 67.3
CSS0031468 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 9.2e-15 84.0 198 34.8
CSS0049066 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.6e-14 83.2 60 65.0
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 4.7e-11 71.6 44 68.2
CSS0043509 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D020258 2.3e-10 69.3 48 66.7
CSS0039481 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 6.8e-10 67.8 61 54.1
CSS0027002 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 8.9e-10 67.4 40 70.0
CSS0006946 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.9e-08 62.4 44 59.1
CSS0031115 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 6.4e-08 61.2 57 56.1
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-07 60.5 66 45.5
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-07 60.5 66 45.5
CSS0048289 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.2e-07 58.9 85 45.9
CSS0020802 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.2e-06 57.0 48 52.1
ClCG02G011100 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.1e-06 56.2 74 37.8
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-06 55.5 40 60.0
HanXRQChr14g0461781 Helianthus annuus HOM05D000002 ORTHO05D000001 7.8e-06 54.3 64 39.1


User provided reference genes

Program Settings