Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.2e-224 781.9 392 100.0
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.3e-163 580.1 398 76.9
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 7.9e-105 384.8 370 57.0
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.4e-98 364.0 354 59.9
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.3e-85 318.9 372 49.5
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.1e-26 125.2 149 45.6
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.0e-23 114.4 119 51.3
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.3e-21 105.5 106 50.0
Actinidia07483 Actinidia chinensis HOM05D011882 ORTHO05D011057 2.1e-20 104.4 157 38.2
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.1e-19 99.8 79 63.3
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.1e-18 98.6 105 48.6
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 3.3e-18 97.1 117 41.9
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.4e-15 87.0 68 57.4
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 1.7e-14 84.7 136 34.6
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 2.2e-14 84.3 110 37.3
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.9e-14 84.0 146 37.7
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 6.4e-14 82.8 92 46.7
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 8.4e-14 82.4 181 32.0
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-13 82.0 103 39.8
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 1.1e-13 82.0 100 42.0
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.4e-13 81.6 121 43.0
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 1.9e-13 81.3 92 45.7
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.2e-13 80.1 142 31.7
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 9.3e-13 79.0 80 40.0
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.2e-12 78.6 117 41.9
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-12 78.2 131 33.6
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.9e-12 75.9 102 41.2
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.9e-12 75.9 155 34.2
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.0e-11 75.5 76 50.0
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 3.0e-11 73.9 88 42.0
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 5.1e-11 73.2 171 28.1
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 6.7e-11 72.8 123 33.3
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 6.7e-11 72.8 90 41.1
Rhsim10G0189500 Rhododendron simsii HOM05D019536 ORTHO05D011057 1.1e-10 72.0 111 36.0
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 1.5e-10 71.6 103 37.9
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 2.5e-10 70.9 226 26.5
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.3e-10 70.5 78 39.7
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 7.4e-10 69.3 143 30.8
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.3e-09 68.6 79 39.2
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-09 68.2 78 39.7
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.6e-09 68.2 78 39.7
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.1e-09 67.8 65 44.6
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 2.8e-09 67.4 100 35.0
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-09 67.4 117 33.3
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.8e-09 66.6 154 29.9
Lsat_1_v5_gn_4_170561 Lactuca sativa HOM05D002777 ORTHO05D001516 8.1e-09 65.9 105 32.4
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.1e-08 65.5 103 34.0
Gohir.A04G039650 Gossypium hirsutum HOM05D011882 ORTHO05D015081 1.4e-08 65.1 80 45.0
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 1.8e-08 64.7 110 35.5
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.4e-08 64.3 116 37.1
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.4e-08 64.3 69 39.1
Rhsim12G0132400 Rhododendron simsii HOM05D011882 ORTHO05D011057 2.4e-08 64.3 108 36.1
Gorai.009G210200 Gossypium raimondii HOM05D038512 ORTHO05D015081 4.0e-08 63.5 98 39.8
Ah.02g117550 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.3e-08 63.2 128 31.2
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 5.3e-08 63.2 71 46.5
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 5.3e-08 63.2 82 41.5
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 5.3e-08 63.2 71 46.5
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 6.9e-08 62.8 155 29.7
PGSC0003DMG401012560 Solanum tuberosum HOM05D003264 ORTHO05D003276 9.0e-08 62.4 83 37.3
Ah.05g171570 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.5e-07 61.6 83 36.1
Lj6g0024174 Lotus japonicus HOM05D002777 ORTHO05D001516 1.5e-07 61.6 99 35.4
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-07 61.2 138 29.7
Sed0010987 Sechium edule HOM05D003264 ORTHO05D003276 2.0e-07 61.2 97 36.1
Lsat_1_v5_gn_5_153820 Lactuca sativa HOM05D003915 ORTHO05D005386 2.6e-07 60.8 168 25.6
Psat3g104680 Pisum sativum HOM05D007807 ORTHO05D001516 2.6e-07 60.8 168 28.6
Atru.chr10.1603 Acer truncatum HOM05D016018 ORTHO05D009583 3.4e-07 60.5 152 25.0
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.4e-07 60.5 123 34.1
Psat1g119760 Pisum sativum HOM05D007807 ORTHO05D001516 3.4e-07 60.5 219 26.5
Psat5g175040 Pisum sativum HOM05D007807 ORTHO05D001516 4.5e-07 60.1 166 27.7
EL10Ac5g11650 Beta vulgaris HOM05D008976 ORTHO05D011121 5.8e-07 59.7 100 30.0
Psat5g029760 Pisum sativum HOM05D007807 ORTHO05D001516 5.8e-07 59.7 185 27.0
Sc10g0004010 Simmondsia chinensis HOM05D031748 ORTHO05D011057 5.8e-07 59.7 69 43.5
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.8e-07 59.7 146 28.1
Lsat_1_v5_gn_8_31381 Lactuca sativa HOM05D003915 ORTHO05D005386 7.6e-07 59.3 171 26.3
Psat3g118120 Pisum sativum HOM05D007807 ORTHO05D001516 9.9e-07 58.9 169 28.4
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 9.9e-07 58.9 102 32.4
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 9.9e-07 58.9 92 37.0
Lj6g0012162 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-06 58.5 121 30.6
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.2e-06 57.8 123 32.5
Ah.05g173090 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.2e-06 57.8 80 37.5
COL.COLO4_26538 Corchorus olitorius HOM05D008263 ORTHO05D009583 2.2e-06 57.8 124 33.1
Lj6g0007004 Lotus japonicus HOM05D019244 ORTHO05D010358 2.2e-06 57.8 79 35.4
Psat2g036200 Pisum sativum HOM05D007807 ORTHO05D001516 2.2e-06 57.8 162 28.4
Psat2g049120 Pisum sativum HOM05D000482 ORTHO05D001516 2.2e-06 57.8 114 31.6
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.9e-06 57.4 78 30.8
Lj1g0023275 Lotus japonicus HOM05D061922 ORTHO05D001516 2.9e-06 57.4 143 32.2
Pp3c11_21430 Physcomitrium patens HOM05D003264 ORTHO05D003276 2.9e-06 57.4 118 30.5
DCAR_000822 Daucus carota HOM05D004122 ORTHO05D004468 3.8e-06 57.0 89 31.5
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 4.9e-06 56.6 183 30.1
Lsat_1_v5_gn_7_84501 Lactuca sativa HOM05D003915 ORTHO05D005386 4.9e-06 56.6 167 28.1
Psat4g004920 Pisum sativum HOM05D007807 ORTHO05D001516 4.9e-06 56.6 119 29.4
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.9e-06 56.6 151 28.5
EL10Ac9g21786 Beta vulgaris HOM05D008976 ORTHO05D011121 6.4e-06 56.2 108 30.6
ECA247G3849 Erigeron canadensis HOM05D000031 ORTHO05D000030 6.4e-06 56.2 127 32.3
Psat1g006160 Pisum sativum HOM05D012595 ORTHO05D001516 6.4e-06 56.2 155 26.5
Ah.06g186480 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.4e-06 55.8 138 28.3
EL10Ac1g01108 Beta vulgaris HOM05D008976 ORTHO05D011121 8.4e-06 55.8 111 27.0


User provided reference genes

Program Settings