Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 4.3e-73 278.1 161 100.0
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 1.9e-28 129.8 173 47.4
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 3.6e-19 99.0 155 45.8
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 2.0e-17 93.2 148 44.6
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 5.7e-17 91.7 168 38.7
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 2.4e-15 86.3 167 36.5
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 5.3e-15 85.1 167 40.7
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 5.9e-14 81.6 160 36.9
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 7.7e-14 81.3 167 34.1
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 1.7e-13 80.1 174 37.9
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 1.4e-12 77.0 198 35.4
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 2.5e-12 76.3 153 37.3
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 7.2e-12 74.7 176 43.2
Lj4P507T35 Lonicera japonica HOM05D007935 ORTHO05D007393 2.1e-11 73.2 110 47.3
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 2.7e-11 72.8 169 37.3
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 2.7e-11 72.8 153 36.6
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 3.6e-11 72.4 158 36.7
Lj4P515T30 Lonicera japonica HOM05D007935 ORTHO05D007393 6.1e-11 71.6 110 47.3
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 8.0e-11 71.2 177 32.8
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 1.4e-10 70.5 167 36.5
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 2.3e-10 69.7 157 34.4
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 2.3e-10 69.7 181 37.6
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 3.9e-10 68.9 179 36.3
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 3.9e-10 68.9 179 33.5
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 6.7e-10 68.2 146 35.6
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 6.7e-10 68.2 155 34.2
BraA07t31373Z Brassica rapa HOM05D010479 ORTHO05D007393 2.6e-09 66.2 164 37.2
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 3.3e-09 65.9 169 36.7
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 4.4e-09 65.5 184 40.8
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 5.7e-09 65.1 167 31.1
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 5.7e-09 65.1 175 30.9
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 7.4e-09 64.7 151 33.8
A07p38090 Brassica napus HOM05D004678 ORTHO05D005880 9.7e-09 64.3 159 37.7
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 9.7e-09 64.3 166 35.5
BcaC08g46627 Brassica carinata HOM05D010479 ORTHO05D007393 1.3e-08 63.9 165 38.2
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 1.3e-08 63.9 138 35.5
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 1.3e-08 63.9 167 31.1
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 1.7e-08 63.5 159 34.0
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 2.8e-08 62.8 155 34.2
BolC6t39652H Brassica oleracea HOM05D010479 ORTHO05D007393 3.7e-08 62.4 165 37.6
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 3.7e-08 62.4 176 34.7
C06p45990 Brassica napus HOM05D004678 ORTHO05D005880 6.3e-08 61.6 168 36.9
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 6.3e-08 61.6 191 33.0
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 8.2e-08 61.2 173 33.5
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 8.2e-08 61.2 172 36.0
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 8.2e-08 61.2 168 35.7
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 1.1e-07 60.8 159 32.7
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 1.1e-07 60.8 172 33.1
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 1.4e-07 60.5 172 35.5
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 4.1e-07 58.9 181 34.3
Sp5g26980 Schrenkiella parvula HOM05D010479 ORTHO05D007393 4.1e-07 58.9 178 36.5
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 5.3e-07 58.5 176 34.1
Psat6g186560 Pisum sativum HOM05D007935 ORTHO05D007393 7.0e-07 58.2 157 36.3
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 7.0e-07 58.2 176 30.7
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 7.0e-07 58.2 176 30.7
A02p17560 Brassica napus HOM05D004678 ORTHO05D005880 9.1e-07 57.8 143 39.2
BraA02t06800Z Brassica rapa HOM05D004678 ORTHO05D005880 1.6e-06 57.0 143 38.5
Thecc.01G147200 Theobroma cacao HOM05D009958 ORTHO05D007393 1.6e-06 57.0 187 30.5
AL2G31520 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 2.0e-06 56.6 177 36.2
BcaB05g24691 Brassica carinata HOM05D010479 ORTHO05D007393 2.0e-06 56.6 171 37.4
COL.COLO4_33532 Corchorus olitorius HOM05D009958 ORTHO05D007393 2.0e-06 56.6 175 32.0
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 2.0e-06 56.6 170 31.2
BcaC03g15309 Brassica carinata HOM05D010479 ORTHO05D007393 3.5e-06 55.8 171 36.3
BolC2t08970H Brassica oleracea HOM05D010479 ORTHO05D007393 3.5e-06 55.8 171 36.3
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 3.5e-06 55.8 173 35.3
Thhalv10019217m.g Eutrema salsugineum HOM05D010479 ORTHO05D007393 5.9e-06 55.1 175 35.4
Aa31LG4G8710 Aethionema arabicum HOM05D010479 ORTHO05D007393 7.7e-06 54.7 157 33.8
Cpa.g.sc138.32 Carica papaya HOM05D009958 ORTHO05D007393 7.7e-06 54.7 158 31.0


User provided reference genes

Program Settings