Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.9e-67 258.5 134 100.0
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.2e-62 240.4 145 89.0
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-57 226.5 145 84.8
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-56 223.0 145 83.4
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.8e-56 220.3 144 82.6
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.8e-56 220.3 144 82.6
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.4e-53 212.2 144 79.2
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 4.5e-52 208.0 144 77.8
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 4.2e-50 201.4 144 75.7
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 4.2e-50 201.4 144 75.0
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 5.5e-50 201.1 144 75.0
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.2e-49 199.9 144 72.9
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.6e-49 199.5 144 73.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.6e-49 199.5 144 75.0
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 2.7e-49 198.7 144 72.9
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.7e-49 198.0 144 75.0
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.7e-49 198.0 144 75.0
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 8.0e-49 197.2 144 72.2
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.4e-48 196.4 144 71.5
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 1.4e-48 196.4 144 74.3
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.8e-48 196.1 144 74.3
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.8e-48 196.1 144 71.5
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 2.3e-48 195.7 143 73.4
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 2.3e-48 195.7 144 72.2
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 3.0e-48 195.3 144 74.3
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 4.0e-48 194.9 144 71.5
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 6.8e-48 194.1 144 71.5
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 8.8e-48 193.7 144 70.8
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 8.8e-48 193.7 144 71.5
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 2.0e-47 192.6 144 71.5
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 2.6e-47 192.2 144 70.8
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 4.4e-47 191.4 144 70.1
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 5.7e-47 191.0 144 70.8
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 5.7e-47 191.0 144 70.8
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 9.8e-47 190.3 144 71.5
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 9.8e-47 190.3 144 71.5
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.3e-46 189.9 144 70.1
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.3e-46 189.9 144 71.5
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.7e-46 189.5 144 72.9
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.2e-46 189.1 144 70.1
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 2.2e-46 189.1 144 70.1
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 2.2e-46 189.1 144 70.1
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 4.9e-46 188.0 143 71.3
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 6.3e-46 187.6 144 68.1
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 8.3e-46 187.2 144 68.8
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 8.3e-46 187.2 144 69.4
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 8.3e-46 187.2 143 68.5
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.1e-45 186.8 144 70.1
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.1e-45 186.8 131 77.1
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 1.1e-45 186.8 144 68.8
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.4e-45 186.4 144 68.8
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.4e-45 186.4 144 68.8
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.4e-45 186.4 144 68.8
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 3.1e-45 185.3 144 68.1
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 5.4e-45 184.5 144 70.8
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 7.0e-45 184.1 144 68.1
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 7.0e-45 184.1 144 69.4
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 7.0e-45 184.1 144 69.4
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 9.1e-45 183.7 144 67.4
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.2e-44 183.3 144 70.8
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.6e-44 183.0 142 68.3
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 2.0e-44 182.6 143 66.4
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 1.0e-43 180.3 144 67.4
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 1.0e-43 180.3 144 67.4
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.0e-43 180.3 128 75.8
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.3e-43 179.9 144 67.4
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.3e-43 179.9 144 66.0
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.3e-43 179.9 144 66.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.7e-43 179.5 144 68.8
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 2.9e-43 178.7 144 64.6
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.9e-42 176.0 144 66.0
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.2e-41 173.3 144 66.7
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.6e-41 172.9 133 69.2
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 6.1e-41 171.0 146 63.0
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 8.0e-41 170.6 145 65.5
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.0e-40 170.2 145 64.1
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.8e-40 169.5 143 64.3
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 4.0e-40 168.3 143 62.2
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 4.0e-40 168.3 141 64.5
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 5.2e-40 167.9 144 65.3
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 5.2e-40 167.9 146 63.0
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 1.2e-39 166.8 145 64.1
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.2e-39 166.8 145 64.1
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 2.0e-39 166.0 145 62.8
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 2.0e-39 166.0 145 62.8
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 2.0e-39 166.0 145 63.4
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.6e-39 165.6 143 65.0
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 2.6e-39 165.6 145 62.1
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 2.6e-39 165.6 145 62.8
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 3.4e-39 165.2 145 62.1
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.4e-39 165.2 145 62.1
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 5.7e-39 164.5 145 63.4
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 5.7e-39 164.5 144 64.6
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 5.7e-39 164.5 144 64.6
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.7e-38 162.9 156 59.6
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.4e-37 159.8 144 59.7
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 2.4e-37 159.1 144 62.5
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.7e-35 152.9 144 60.4
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 9.5e-34 147.1 145 60.0
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 1.0e-32 143.7 145 57.2
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 6.8e-32 141.0 146 57.5
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.3e-30 136.7 80 88.8
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.7e-27 126.3 140 55.0
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.7e-27 126.3 140 55.0
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.3e-27 125.9 141 53.9
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.8e-25 119.0 138 52.9
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.4e-24 116.7 129 53.5
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 2.3e-24 115.9 129 50.4
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.2e-23 113.6 126 54.8
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 3.2e-21 105.5 123 53.7
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 7.1e-21 104.4 80 68.8
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 2.1e-20 102.8 136 43.4
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 3.5e-20 102.1 128 48.4
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 2.1e-17 92.8 127 46.5
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 4.0e-16 88.6 132 41.7
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 2.0e-15 86.3 132 40.9
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.9e-13 79.7 139 39.6
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 4.7e-09 65.1 128 35.2
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.7e-06 56.6 41 58.5


User provided reference genes

Program Settings