Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 8.1e-134 480.3 230 100.0
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.0e-104 382.1 213 85.0
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.0e-95 352.8 228 75.4
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.4e-95 351.7 228 74.6
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.2e-86 322.8 212 72.6
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.8e-40 168.3 167 45.5
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.0e-39 166.8 167 45.5
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.4e-37 160.6 167 43.1
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 7.1e-37 158.3 131 52.7
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.3e-34 149.1 182 37.4
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.3e-34 148.3 176 36.9
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.3e-34 148.3 176 36.9
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.6e-33 147.1 176 36.9
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.6e-33 146.0 176 37.5
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 1.8e-32 143.7 176 35.2
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 6.4e-30 135.2 165 40.0
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.3e-26 122.5 168 33.3
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-25 120.6 123 41.5
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 2.1e-25 120.2 133 37.6
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-25 120.2 154 37.7
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.6e-25 119.4 193 32.6
CSS0018900 Camellia sinensis var. sinensis HOM05D047189 ORTHO05D001590 4.8e-25 119.0 138 44.2
CSS0038129 Camellia sinensis var. sinensis HOM05D047189 ORTHO05D001590 8.1e-25 118.2 138 44.2
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 8.1e-25 118.2 166 38.0
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.0e-24 115.9 141 39.0
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 5.3e-24 115.5 131 35.9
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.9e-24 115.2 153 34.6
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-24 115.2 123 39.8
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-24 115.2 123 39.8
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-23 114.0 127 37.0
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 7.6e-23 111.7 139 37.4
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-22 110.9 139 37.4
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.4e-22 108.6 122 36.9
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 8.4e-22 108.2 105 44.8
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.1e-21 107.8 165 32.1
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.4e-21 107.5 207 29.0
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.2e-21 106.3 205 29.8
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.2e-21 106.3 124 33.1
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.4e-21 105.5 152 31.6
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.4e-21 105.5 152 31.6
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.1e-21 105.1 156 36.5
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 9.3e-21 104.8 164 30.5
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.6e-20 104.0 167 31.7
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.1e-20 103.6 134 35.8
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-20 103.2 145 36.6
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-20 102.4 185 27.6
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.8e-20 101.7 185 27.6
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.0e-19 101.3 133 33.8
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-19 100.9 123 33.3
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-19 100.5 123 33.3
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 1.7e-19 100.5 123 33.3
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.3e-19 100.1 105 41.9
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-19 99.8 127 36.2
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-19 99.8 127 36.2
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-19 99.8 127 36.2
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-19 99.8 127 36.2
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-19 99.8 127 36.2
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-19 99.8 127 36.2
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-19 99.4 153 30.7
CSS0001173 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.1e-19 99.0 75 57.3
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 5.1e-19 99.0 143 33.6
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.6e-19 98.6 127 35.4
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.5e-18 96.7 127 35.4
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.5e-18 96.7 145 34.5
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.3e-18 96.3 123 31.7
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-18 95.5 135 34.8
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 5.6e-18 95.5 92 40.2
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 5.6e-18 95.5 92 40.2
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-18 95.1 135 34.8
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-18 95.1 130 33.8
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-18 95.1 135 34.8
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-18 95.1 142 33.8
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.6e-18 94.7 144 31.9
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.6e-18 94.7 144 31.9
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.6e-18 94.7 144 31.9
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-17 94.4 135 34.8
FAN05G1235 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.6e-17 94.0 103 38.8
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-17 94.0 123 30.9
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-17 94.0 135 34.8
CSS0034224 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 2.8e-17 93.2 73 54.8
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-17 93.2 123 30.9
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 3.6e-17 92.8 135 33.3
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.8e-17 92.4 167 34.1
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-17 92.4 123 30.9
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.2e-17 92.0 107 37.4
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-16 91.3 123 30.1
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.1e-16 89.7 99 39.4
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 4.0e-16 89.4 113 36.3
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 4.0e-16 89.4 113 36.3
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 4.0e-16 89.4 113 36.3
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 4.0e-16 89.4 168 29.8
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 9.0e-16 88.2 135 31.9
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.0e-16 88.2 135 31.9
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.0e-16 88.2 135 31.9
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.0e-16 88.2 135 31.9
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.5e-15 87.4 141 29.8
PSO675G7395 Papaver somniferum HOM05D008588 ORTHO05D010137 2.0e-15 87.0 114 39.5
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-15 87.0 107 36.4
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-15 87.0 185 26.5
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 2.0e-15 87.0 113 35.4
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.4e-15 86.3 124 30.6
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 7.6e-15 85.1 148 28.4
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 9.9e-15 84.7 141 29.8
PSO210G2316 Papaver somniferum HOM05D008588 ORTHO05D010137 1.3e-14 84.3 108 40.7
PSO541G0958 Papaver somniferum HOM05D008588 ORTHO05D010137 1.3e-14 84.3 108 40.7
PSO063G6468 Papaver somniferum HOM05D008588 ORTHO05D010137 2.2e-14 83.6 108 39.8
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.4e-13 80.1 107 34.6
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-13 79.7 96 37.5
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 5.4e-13 79.0 105 34.3
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-12 77.4 95 33.7
Actinidia12982 Actinidia chinensis HOM05D007376 ORTHO05D001590 2.1e-12 77.0 76 40.8
FAN18G1258 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.1e-12 77.0 171 25.7
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-12 77.0 80 38.8
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.5e-12 76.3 96 35.4
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.0e-11 74.7 106 36.8
Aqoxy5G02562 Aquilegia oxysepala HOM05D001313 ORTHO05D001590 2.3e-11 73.6 136 27.9
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 2.3e-11 73.6 128 23.4
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 3.0e-11 73.2 134 28.4
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 5.1e-11 72.4 145 25.5
MD05G1071400 Malus domestica HOM05D001313 ORTHO05D001590 8.7e-11 71.6 146 24.0
Aqoxy2G02824 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 1.9e-10 70.5 126 31.0
PSO104G0253 Papaver somniferum HOM05D009650 ORTHO05D011166 2.5e-10 70.1 110 34.5
FvH4_2g03221 Fragaria vesca HOM05D001313 ORTHO05D001590 3.3e-10 69.7 157 29.9
FvH4_4g08592 Fragaria vesca HOM05D001313 ORTHO05D001590 4.3e-10 69.3 127 30.7
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 4.3e-10 69.3 174 24.1
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 7.4e-10 68.6 107 30.8
FvH4_4g17740 Fragaria vesca HOM05D001313 ORTHO05D001590 1.3e-09 67.8 130 29.2
FAN12G2584 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.6e-09 67.4 157 27.4
FvH4_2g35252 Fragaria vesca HOM05D011367 ORTHO05D001590 2.8e-09 66.6 114 30.7
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.8e-09 66.6 145 23.4
RcHm_v2.0_Chr4g0421591 Rosa chinensis HOM05D001313 ORTHO05D001590 3.7e-09 66.2 128 25.0
FAN06G4349 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.8e-09 65.9 158 27.8
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 8.1e-09 65.1 72 43.1
Rhsim07G0128100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-08 64.7 97 30.9
Aqoxy3G02580 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 1.4e-08 64.3 120 29.2
Aqoxy5G01956 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 1.4e-08 64.3 120 29.2
Aqoxy5G02161 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 1.4e-08 64.3 125 28.8
FvH4_2g01890 Fragaria vesca HOM05D001313 ORTHO05D001590 1.4e-08 64.3 126 29.4
FvH4_3g30870 Fragaria vesca HOM05D001313 ORTHO05D001590 1.4e-08 64.3 126 28.6
FvH4_6g20370 Fragaria vesca HOM05D001313 ORTHO05D001590 1.4e-08 64.3 126 27.8
FvH4_1g24741 Fragaria vesca HOM05D001313 ORTHO05D001590 3.1e-08 63.2 127 28.3
FvH4_1g28820 Fragaria vesca HOM05D001313 ORTHO05D001590 3.1e-08 63.2 156 28.8
PSO761G0311 Papaver somniferum HOM05D033234 ORTHO05D010137 3.1e-08 63.2 110 30.0
Actinidia09092 Actinidia chinensis HOM05D026250 ORTHO05D026319 4.0e-08 62.8 85 32.9
FAN18G1148 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.0e-08 61.6 132 26.5
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-07 60.5 185 23.2
FvH4_3g31650 Fragaria vesca HOM05D001313 ORTHO05D001590 2.6e-07 60.1 108 27.8
FAN19G2770 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.4e-07 59.7 126 28.6
FvH4_1g20524 Fragaria vesca HOM05D001313 ORTHO05D001590 4.5e-07 59.3 123 27.6
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 4.5e-07 59.3 79 31.6
PSO384G0458 Papaver somniferum HOM05D020661 ORTHO05D010137 5.8e-07 58.9 110 30.9
PSO339G4851 Papaver somniferum HOM05D020661 ORTHO05D010137 1.0e-06 58.2 128 30.5
FvH4_5g37401 Fragaria vesca HOM05D001313 ORTHO05D001590 1.3e-06 57.8 126 26.2
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.2e-06 57.0 178 21.3
FAN19G2053 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.9e-06 56.6 126 27.8
PSO063G4030 Papaver somniferum HOM05D008588 ORTHO05D010137 2.9e-06 56.6 72 38.9
PSO566G0023 Papaver somniferum HOM05D008588 ORTHO05D010137 2.9e-06 56.6 72 38.9
PSO675G2347 Papaver somniferum HOM05D008588 ORTHO05D010137 2.9e-06 56.6 72 38.9
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 4.9e-06 55.8 56 37.5
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 8.4e-06 55.1 176 21.6
FvH4_4g10272 Fragaria vesca HOM05D001313 ORTHO05D001590 8.4e-06 55.1 90 30.0


User provided reference genes

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