Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.6e-43 179.1 95 100.0
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.6e-43 179.1 95 100.0
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 2.9e-37 158.3 88 92.0
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 8.5e-37 156.8 88 92.0
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.9e-36 155.6 88 89.8
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 2.5e-36 155.2 86 91.9
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 9.4e-36 153.3 88 89.8
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 1.2e-35 152.9 88 87.5
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 1.6e-35 152.5 88 88.6
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 2.1e-35 152.1 88 88.6
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 2.1e-35 152.1 88 88.6
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 2.1e-35 152.1 88 88.6
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.7e-35 151.8 88 88.6
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 2.7e-35 151.8 92 82.6
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 4.7e-35 151.0 95 80.0
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 4.7e-35 151.0 86 88.4
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 4.7e-35 151.0 86 89.5
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 4.7e-35 151.0 86 89.5
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 6.1e-35 150.6 92 83.7
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 6.1e-35 150.6 95 80.0
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 7.9e-35 150.2 95 78.9
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 7.9e-35 150.2 86 88.4
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 1.0e-34 149.8 86 88.4
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 1.0e-34 149.8 92 83.7
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 1.4e-34 149.4 87 87.4
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.4e-34 149.4 86 88.4
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 1.4e-34 149.4 88 84.1
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 1.4e-34 149.4 86 86.0
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.4e-34 149.4 87 86.2
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 2.3e-34 148.7 87 86.2
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 3.0e-34 148.3 88 83.0
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 3.0e-34 148.3 88 84.1
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 3.9e-34 147.9 88 86.4
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 3.9e-34 147.9 88 84.1
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 5.2e-34 147.5 87 86.2
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 6.7e-34 147.1 88 85.2
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 8.8e-34 146.7 88 84.1
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 8.8e-34 146.7 88 84.1
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 1.1e-33 146.4 88 85.2
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 1.1e-33 146.4 88 81.8
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 1.1e-33 146.4 92 81.5
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 1.5e-33 146.0 88 83.0
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 2.0e-33 145.6 88 83.0
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.0e-33 145.6 88 83.0
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 2.0e-33 145.6 88 83.0
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 3.3e-33 144.8 86 86.0
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 4.4e-33 144.4 93 78.5
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 4.4e-33 144.4 93 78.5
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 5.7e-33 144.1 93 80.6
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 5.7e-33 144.1 86 83.7
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 5.7e-33 144.1 87 81.6
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 7.4e-33 143.7 88 83.0
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.7e-32 142.5 90 82.2
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 2.8e-32 141.7 87 82.8
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 3.7e-32 141.4 88 80.7
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 3.7e-32 141.4 92 80.4
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 4.8e-32 141.0 90 81.1
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 6.3e-32 140.6 95 75.8
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 6.3e-32 140.6 88 79.5
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 6.3e-32 140.6 88 79.5
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 8.2e-32 140.2 87 79.3
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 8.2e-32 140.2 91 78.0
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 1.1e-31 139.8 90 80.0
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 1.8e-31 139.0 85 82.4
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.8e-31 139.0 90 78.9
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.8e-31 139.0 90 78.9
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 3.1e-31 138.3 91 81.3
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 3.1e-31 138.3 86 79.1
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 4.1e-31 137.9 93 78.5
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 5.3e-31 137.5 84 83.3
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 5.3e-31 137.5 84 83.3
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 2.0e-30 135.6 91 75.8
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 2.6e-30 135.2 85 81.2
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 2.6e-30 135.2 91 74.7
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 5.9e-30 134.0 90 75.6
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 7.7e-30 133.7 87 77.0
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 1.0e-29 133.3 99 73.7
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.0e-29 133.3 87 78.2
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 2.2e-29 132.1 85 80.0
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 2.2e-29 132.1 91 73.6
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 2.2e-29 132.1 92 73.9
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 3.8e-29 131.3 85 78.8
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 6.5e-29 130.6 88 73.9
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 6.5e-29 130.6 85 77.6
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 8.5e-29 130.2 89 74.2
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 8.5e-29 130.2 89 74.2
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 8.5e-29 130.2 89 74.2
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 1.5e-28 129.4 89 73.0
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 2.5e-28 128.6 89 73.0
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 5.5e-28 127.5 83 75.9
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 6.1e-27 124.0 86 72.1
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 8.0e-27 123.6 92 72.8
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 1.4e-26 122.9 68 91.2
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 1.4e-26 122.9 153 50.3
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.3e-26 122.1 79 79.7
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 4.0e-26 121.3 67 91.0
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 5.2e-26 120.9 83 69.9
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 5.2e-26 120.9 70 88.6
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.2e-25 119.8 68 89.7
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.5e-25 119.4 70 87.1
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 4.4e-25 117.9 85 71.8
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 1.7e-24 115.9 93 68.8
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 3.7e-24 114.8 67 83.6
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 8.2e-24 113.6 76 76.3
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.1e-23 113.2 65 84.6
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 1.8e-23 112.5 65 86.2
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 1.8e-23 112.5 65 86.2
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 7.0e-23 110.5 67 83.6
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 1.6e-22 109.4 68 79.4
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.7e-22 108.6 69 78.3
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 4.5e-22 107.8 71 77.5
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 9.4e-20 100.1 80 65.0
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 1.4e-18 96.3 89 58.4
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 4.0e-18 94.7 63 77.8
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 1.5e-17 92.8 79 59.5
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 1.7e-16 89.4 108 50.0


User provided reference genes

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